Input sequence

Protein name RNA polymerase II-associated protein 1
Organism Mus musculus Length 1409
Disorder content 30.1% ProS content 13.9%
IDEAL NA UniProt Q80TE0

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:SCOP SEG:LCR 0 1409 1-369 370-519 520-541 542-620 621-626 627-761 762-765 766-884 885-904 905-1049 1050-1054 1055-1336 1337-1341 1342-1400 1401-1409 370-519 542-620 627-761 766-884 905-1049 1055-1336 1342-1400 1-369 520-541 762-765 885-904 1401-1409 1-37 82-88 95-117 127-140 151-161 224-271 333-361 762-765 885-898 1401-1409 861-985 374-437 225-266 224-272 370-441 408-611 62-81 391-400 451-473 476-488 515-529 739-752 843-860 989-1007 1042-1052 1097-1108 1193-1204 3zniA(157-281) 3e-05 19.2% PF08620(5-72) 8e-07 55.88% PF08621(2-43) 2e-06 57.14% PF08621 2.8e-20 78.0% PF08620 1.6e-38 138.6% a.118.1 0.00047 10.4%

Sequence

MMLSRPKPGESEVDLLRFQSQFLEAGAAPAVQLVKGSRRHGDAPPDRLPPQDHRDVVMLD
NLPDLPPALLPAPAKRARPSPGHPLPHDEDPEERLNRHDQHITAVLSKIVERDTSSVTVT
LPVPSGVAFPPVFHRSQERQVKPAASGKRSIFAQEIAARRVSGNRVTSAEQVVPSLDTPE
GAVPCETPSFRDRSNQLPGRSHGFHRPNLVTGKGLRSKVAEQEVQTIHEENVARLQAMDP
EEILKEQQQLLAQLDPSLVAFLRSHSQVQEQTGTKATKKQSPKRPSVLVTKEEPVTSTRT
REPRTGDKLEEKPEATVEDKMEDKLQPRTPALKLPMTPSKDWLHMDTVELDKLHWTQDLP
PLRRQQTQERMQARFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVS
QQRALALQVLSQIVGRAQAGEFGDRLVGSVLRLLLDAGFLFLLRFSLDDRVDSVIAAAVR
ALRTLLVAPGDEELLDRTFSWYHGASVFPLMPSQDDKEDEDEDEELETEKVKRKTPEEGS
RPPPDLARHDVIKGLLATNLLPRLRYVLEVTCPGPSVILDILAVLIRLARHSLESAMRVL
ECPRLMETIVQEFLPTSWSPIGVGPTPSLYKVPCASAMKLLRVLASAGRNIAARLLSGFD
VRSRLCRFIAEAPHDLALPPEEAEILTTEAFRLWAVAASYGQGGDLYRELYPVLLRALQT
LPTELSAHPLQPLAMQRVAALFTLLTQLTLAASSIPPEPASGPAESCVPAIPSSVTWTQV
SGLKPLVEPCLKQTLKFLPRPDVWNALGPVPSACLLFLGAYYQAWSRQSHLCPEDWLQDM
ERLLDESLLPLLSQPPLGSLWDSLRDCSPLCNPLSCASNPEALPSLVSLGCAGGCPPLSV
AGSASPFPFLTALLSLINTLVQSHKGLCGQLSAVLTAPGLQNYFLQCVAPAPAPQLTPFS
AWALHHEYHLQYLVLSFAHKAATLQPEPAASTALHHAVALVLLSRLLPGSEYLAQELLLS
CVFRLEFLPESASGGPEAADFSDGLSLGSSGDPQCRRGALLVQACRDLPSIRSCYLAHCS
PARASLLSSQALYCGELLRVSSLLLPVPKEPLLATDWPFQPLIHLYHRASDTPSGPPAAD
TVGVAMRVLQWVLVLESWRPEVLWAVPPAARLARLMCVYLVDSELFRETPIQRLVAALLA
RLCRPQVLPNLKLDCPLPGLTSFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTL
RLALFGEHVGVLRALGLPLTQLPVPLECYTEPAEDSLPLLQLYFRALVTGTLRARWCPIL
YTVAVAHVNSFIFCQDPKSSDEVKTARRSMLQRTWLLTDEGLRQHLLHYKLPNSSLPEGF
ELYSQLPRLRQQCLQTLPTEGLQNGGVKT

Region:1-1409
Length:1409aa
Label:Full sequence
Reset:click