Input sequence

Protein name Probable glutamate carboxypeptidase LAMP1
Organism Arabidopsis thaliana Length 681
Disorder content 1.2% ProS content 0.9%
IDEAL NA UniProt Q7Y228

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 681 1-6 7-24 25-26 27-36 37-40 41-681 7-24 27-36 41-681 1-6 25-26 1-6 49-677 41-677 326-497 567-673 142-201 136-239 326-511 546-679 324-533 114-278 534-677 251-534 523-680 14-24 279-297 311-323 7-24 3fecA(19-687) 5e-108 36.52% 4tweA(19-701) 7e-118 31.69% PF04389(1-161) 7e-25 40.57% PF04253(16-113) 2e-16 38.32% PF02225(7-65) 0.0002 43.33% PF02225 6.5e-20 76.8% PF04389 1.3e-13 55.8% PF04253 3.7e-11 47.7% 1z8lA3(79-304) 1e-72 40.71% 1z8lA2(21-191) 2e-50 36.78% 1z8lA1(1-154) 9e-15 29.87% c.56.5 3.1e-82 253.0% a.48.2 4.2e-36 122.7%

Sequence

MSKSKSLAFVIAALSYSFFSLFSSPPKSHYHELFISTSFSDNASVALNLHTLTRRPHVAG
TVANAEAAEYVRSVFTSSALKSHVVAYQVSLTYPVHRSLVLTPTDSAKPITFLLEQEKLG
DNPYANEVMPTFHGYAKSGNVSGPVVYANYGRVEDFVRLKKDMGVNVSGAVVIARYGQIY
RGDIVKNAYEAGAVGVVIYTDKRDYGGDEWFPASKWMPPSGVQVGTVYNGLGDPTTPGWA
SVDGCERLSDEAVELSGDVPLIPSLPVSAADAEVILKTVVGDVSDGDVYPVGPGPGVLNL
SYIGETVIAKIENVIGVIEGEEEPDRYVILGNHRDAWTFGAVDPNSGTAVLMEIAQRLDK
LQKRGWKPRRTIILCNWDAEEYGLIGSTEWVEENREMLSSRAVAYLNVDCAVSGPGFHAS
ATPQLDELIKVAAQEVRDPDNATQTIYESWIGSSDSVVIRRLGGGGSDYASFVQHVGVPG
VDMSFGRGYPVYHSMYDDFTWMEKFGDPMFQRHVAMASVLGLVALRLADEEIIPFNYTSY
ALELKKSAEDLENEKLGHNIDVSTLIKSIEDLSTAAKHISLEKEAIKGALKVRELNDRLM
MAERALTDRDGLSERPWYKHLIYGPSKYDDYGSKSFPGVDDAIDNAKKLNTKASWENVQH
QIWRVSRAIRHASLVLKGELI

Region:1-681
Length:681aa
Label:Full sequence
Reset:click