Input sequence

Protein name Probable cleavage and polyadenylation specificity factor subunit 1
Organism Oryza sativa subsp.japonica Length 1441
Disorder content 14.4% ProS content 7.6%
IDEAL NA UniProt Q7XWP1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR 0 1441 1-26 27-43 44-47 48-85 86-101 102-105 106-216 217-229 230-445 446-448 449-502 503-530 531-537 538-589 590-595 596-673 674-680 681-721 722-727 728-748 749-773 774-813 814-819 820-839 840-881 882-887 888-926 927-1053 1054-1071 1072-1317 1318-1329 1330-1441 1-26 48-85 106-216 230-445 503-530 538-589 596-673 681-721 728-748 774-813 840-881 927-1053 1072-1317 1330-1441 44-47 86-101 217-229 449-502 531-537 749-773 820-839 888-926 1054-1071 1318-1329 44-47 100-101 217-222 468-471 477-495 762-773 835-839 888-926 1054-1071 1013-1435 246-658 104-1429 1095-1402 1077-1375 64-78 87-98 673-681 4a0aA(392-777) 4e-19 21.99% 2b5lA(159-479) 4e-11 20.38% 2b5lA(44-1113) 2e-84 15.8% PF03178(12-300) 4e-42 34.09% PF03178 5.3e-58 203.3%

Sequence

MSYAAYKMMHWPTGVDHCAAGFVTHSPSDAAAFFTAATVGPGPEGDIDSAAAASRPRRLG
PSPNLVVAAANVLEVYAVRAETAAEDGGGGTQPSSSSGAVLDGISGARLELVCYYRLHGN
IESMTVLSDGAENRRATIALAFKDAKITCLEFDDAIHGLRTSSMHCFEGPEWQHLKRGRE
SFAWGPVIKADPLGRCGAALAYGLQMIILKAAQVGHSLVGEDEPTCALSSTAVCIESSYL
IDLRALDMNHVKDFAFVHGYIEPVLVILHEQEPTWAGRILSKHHTCMISAFSISMTLKQH
PVIWSAANLPHDAYQLLAVPPPISGVLVICANSIHYHSQSTSCSLDLNNFSSHPDGSPEI
SKSNFQVELDAAKATWLSNDIVMFSTKAGEMLLLTVVYDGRVVQRLDLMKSKASVLSSAV
TSIGNSFFFLGSRLGDSLLVQFSYCASKSVLQDLTNERSADIEGDLPFSKRLKRIPSDVL
QDVTSVEELSFQNIIAPNSLESAQKISYIVRDALINVGPLKDFSYGLRANADPNAMGNAK
QSNYELVCCSGHGKNGSLSVLQQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYH
AYLIISLENRTMVLETGDDLGEVTETVDYFVQASTIAAGNLFGRRRVIQVYGKGARVLDG
SFMTQELNFTTHASESSSSEALGVACASIADPYVLLKMVDGSVQLLIGDYCTCTLSVNAP
SIFISSSERIAACTLYRDRGPEPWLTKTRSDAWLSTGIAEAIDGNGTSSHDQSDIYCIIC
YESGKLEIFEVPSFRCVFSVENFISGEALLVDKFSQLIYEDSTKERYDCTKASLKKEAGD
SIRIVELAMHRWSGQFSRPFLFGLLNDGTLLCYHAFSYEASESNVKRVPLSPQGSADHHN
ASDSRLRNLRFHRVSIDITSREDIPTLGRPRITTFNNVGGYEGLFLSGTRPAWVMVCRQR
LRVHPQLCDGPIEAFTVLHNVNCSHGFIYVTSQGFLKICQLPSAYNYDSYWPVQKVPLHG
TPHQVTYYAEQSLYPLIVSVPVVRPLNQVLSSMADQESVHHMDNDVTSTDALHKTYTVDE
FEVRILELEKPGGHWETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVLGED
VAARGRVLLFSFTKSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGA
ELTAVAFYDAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFAT
EFLIDGSTLSLVASDSDKNVQIFYYAPKMVESWKGQKLLSRAEFHVGAHITKFLRLQMLP
TQGLSSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFR
QFHSNGKGHRPGPDNIIDFELLCSYEMLSLDEQLDVAQQIGTTRSQILSNFSDISLGTSF
L

Region:1-1441
Length:1441aa
Label:Full sequence
Reset:click