Input sequence

Protein name Casparian strip membrane protein 1
Organism Oryza sativa subsp.japonica Length 224
Disorder content 24.1% ProS content 10.7%
IDEAL NA UniProt Q7XPU9

Prediction

Order Disorder ProS RPS-BLAST:Pfam HMMER:Pfam SEG:LCR TMHMM:TMhelix 0 224 1-19 20-42 43-62 63-133 134-145 146-221 222-224 20-42 63-133 146-221 1-19 43-62 134-145 222-224 8-12 59-62 134-145 222-224 63-209 60-209 20-43 73-82 156-168 20-42 63-85 111-133 146-168 199-221 PF04535(3-147) 1e-14 41.33% PF04535 1.5e-44 158.6%

Sequence

MSSGEPAAVSIPIHDHHGKAPATSSAVPAAAAAAPAAAPAVAPRKVGIPFFRRGDHHRGS
RCLAFLDFILRIAAFGPALAAAISTGTSDETLSVFTEFYQFRARFDDFPAFLFFLVANAI
VAGYLVLSLPFSAVLVIRPQTIGLRLLLLVCDMIMAAMLTAAASAAAAIVDLAHNGNLRA
NWVAICMQFHGFCQRTSGSVVASFLTVVILMFLVILAACSIRKR

Region:1-224
Length:224aa
Label:Full sequence
Reset:click