Input sequence

Protein name Putative DNA ligase 4
Organism Oryza sativa subsp.japonica Length 1322
Disorder content 30.6% ProS content 19.0%
IDEAL NA UniProt Q7X7E9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1322 1-3 4-144 145-151 152-357 358-372 373-472 473-488 489-942 943-1216 1217-1221 1222-1232 1233-1237 1238-1322 4-144 152-357 373-472 489-942 1217-1221 1233-1237 1-3 358-372 473-488 943-1216 1222-1232 1238-1322 1-3 358-372 473-488 943-948 1000-1013 1019-1044 1057-1100 1109-1120 1126-1130 1138-1150 1170-1216 1222-1232 1238-1243 1250-1257 1293-1302 1308-1322 44-686 711-933 44-694 715-935 253-521 45-196 241-521 545-622 233-527 556-689 829-937 716-765 235-417 497-521 717-764 829-936 19-37 95-107 534-547 941-950 986-1002 1050-1059 1181-1190 1261-1288 3w1bA(55-578) 4e-63 29.91% 3ii6X(22-254) 2e-09 23.77% 3w1bA(55-586) 2e-45 26.82% 3ii6X(28-256) 4e-27 20.34% PF01068(12-201) 1e-14 25.83% PF04675(41-171) 2e-14 36.36% PF01068 5.6e-26 96.9% PF04679 3.8e-19 74.2% 1x9nA3(1-219) 7e-24 19.67% 1x9nA2(27-138) 2e-15 22.22% 1cdzA(5-94) 2e-06 18.35% 1cdzA(31-89) 0.0002 18.64% d.142.2 1.3e-25 71.3% d.142.2 9e-10 26.8% c.15.1 4.6e-07 25.4% c.15.1 1.6e-12 42.3%

Sequence

MAATVRFGLLVAMFQAMSRDRTAAKKRARLRALLDRAYGPGGRDDYFSALRLVLPGLDRE
RGSYGLKEAALASVLVDALGIAKDSPDAVRLTNWRRGGGFRNAGNFALVAAEVLQRRQGM
TSGGLTIKEVNDALDRLAATENSVCLESEKLLLILDRSEKASILSSLIKKTNALEMKWLL
MIILKDLKLGISEKSVFHEFHPDAEDLFNVTCDLRLVCEKLNDRSQRHKRQDIEVGKAVR
PQLSMRVNNASSAWKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAPGMS
KVIIENILVDRCILDGEMLVWDTVLNRFAEFGSNQEIAKAAKEGLETDRQLCCILEWIAS
YVLALCVNILSCQDFFFSNKRESYVAFDILYAGDTSVIHQSLTERHEILQKVVRPLKGHL
EILVPTGGLNIHRPPDEPCWSILAHSLDDVEKFFKDTVDNRFFPTSPNTDELSNLSISLM
IQFRFSDYSICYVLREEGIILKDLESKWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYY
GSGRRGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEY
PKKPPRFYEVTNHSKERPDVWIESPDKQSVRFRKHLIYCITKCRSVIISITSDIRTIKSE
VFAAPYSLRFPRIQRLRYDKPWHECLDVQAFVDIVHSSNGTTHRAADDDNDLKNVKNGGS
FSMNLNDSVTHCIAAEKKATRQGRIIHYSWILDCCKEKRLLHLQPKFDPCLQPMHKFPEE
IDSYADYFYWDIDISDLKQIFSNMDRAVVDSNMVHHYKKKYCADERFCFFQGCCVYFYHA
PLVNADYNVISDLALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQAYNFDMLYKSLPPA
ERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETVQPCNDKLE
ENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDVEPEESDHG
ETGLDDQIPDTDNISKMEVDSFDKDQVSARPVRRTRARRGKQHAKIDYGQSEESDPGETG
QDDQRLDADYISKMEEDSSDRDQGAHPTAPRVVRRSRAQRGKWLAKIDRETGPGETGQDD
KKLNADSISKMEEHAHDKDQEPPPGAQLITLDEQEPKGIKSSTTETPSSPKHERNQTVLR
RDTAETTSSATCEKMEQMVDPLHAMLLDMIPSLGQMKTDVGNRVAEAKAETNPPWVGSST
SSYVAPVPQASASSASSSGVPAPHAGSSTQSTGVPAPDPTAGAPKKKKVSYKDVAGALLK
DW

Region:1-1322
Length:1322aa
Label:Full sequence
Reset:click