Input sequence

Protein name Protocadherin-8
Organism Mus musculus Length 1070
Disorder content 28.8% ProS content 21.3%
IDEAL NA UniProt Q7TSK3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1070 1-26 27-363 364-364 365-396 397-714 715-723 724-740 741-746 747-747 748-770 771-909 910-913 914-989 990-1053 1054-1070 27-363 397-714 741-746 748-770 910-913 990-1053 1-26 365-396 724-740 747-747 771-909 914-989 1054-1070 1-26 747-747 771-793 800-821 829-832 844-849 857-909 914-989 1054-1070 455-654 239-352 403-495 25-135 121-237 141-700 34-237 504-600 397-487 140-236 253-344 619-700 32-109 30-112 140-236 251-345 397-488 502-600 619-711 202-648 603-700 129-243 1-100 26-128 129-237 233-354 395-490 485-648 603-712 264-274 360-392 701-725 759-771 782-802 828-860 910-933 974-980 748-770 2a62A(63-255) 8e-17 32.37% 2ystA(8-119) 7e-13 42.11% 2ystA(25-119) 0.0008 28.42% 1wyjA(6-115) 7e-13 37.17% 2wcpA(96-206) 1e-07 34.75% 3q2wA(6-530) 4e-59 20.27% 2wcpA(14-206) 2e-23 26.19% PF00028(3-92) 2e-11 46.39% PF00028(1-91) 3e-06 36.26% PF00028(1-92) 1e-05 35.35% PF00028(3-91) 1e-05 38.04% PF00028(1-81) 0.0001 35.37% PF08266(3-81) 6e-10 43.75% PF08266 3.4e-08 26.3% PF00028 1.4e-10 45.8% PF00028 2.7e-21 81.3% PF00028 5.1e-14 57.2% PF00028 8.1e-19 73.1% PF00028 1.8e-13 55.3% 1dnvA(15-392) 4e-58 6.15% 1edhA2(1-100) 7e-09 20.95% 1l3wA5(1-104) 3e-16 13.04% 1f5aA1(24-118) 2e-11 16.0% b.1.6 8.1e-09 33.3% b.1.6 4.2e-23 80.8% b.1.6 7.6e-26 89.4% b.1.6 1.3e-17 60.8% b.1.6 3.1e-35 121.6% b.1.6 1.2e-16 58.6%

Sequence

MSPAKRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGPSPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSESAPVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQASYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLD
PRSGRLTLAGQVDYERQDTYELDVRAQDRGPGPRTATCKVIVRIRDVNDNAPEISITPLA
APGAPATSPFAAAAAAAALGGADAASSTGSGTQEAGITSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGTPPLRTV
RPYTVRVGDENDNAPIFTKPVYEVSVRENNPPGAYLATVAARDPDVGRNGQVTYRLVEAE
VGRSGEAVSTYVSVDPATGAIYALRSFDYETLRQLDVRVQASDGGSPQLSSNALVQVRVL
DQNDHSPILVHPAPANGSLEVAVPGRSTKDTAVARIQARDADEGANGELAFDLLQQEPRE
AFSIGRHTGEIMLTGDLSQEPPGRVFKALLVISDGGRPPLTTTATVSFVVTAGGGSAVPA
SSGSPEHSRPPGSRLAPSGPSLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEVR
KGGALREERPGAAGGGASAPGSPDETARGTGPRPNMFDVLTFPGSGKAPFGSPAADAPPP
AVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAAPPVAVWKGHSF
NTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHS
DRCWSPSCAGPNVHPPPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKV
LHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYESPPGSRYVSPKKGINENV

Region:1-1070
Length:1070aa
Label:Full sequence
Reset:click