Input sequence

Protein name Retrotransposon-like protein 1
Organism Mus musculus Length 1744
Disorder content 34.1% ProS content 15.5%
IDEAL NA UniProt Q7M732

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1744 1-451 452-625 626-655 656-786 787-803 804-841 842-847 848-1250 1251-1266 1267-1274 1275-1286 1287-1354 1355-1366 1367-1497 1498-1513 1514-1573 1574-1577 1578-1604 1605-1610 1611-1651 1652-1670 1671-1674 1675-1723 1724-1744 452-625 656-786 804-841 848-1250 1267-1274 1287-1354 1367-1497 1514-1573 1578-1604 1611-1651 1675-1723 1-451 626-655 787-803 1251-1266 1275-1286 1355-1366 1498-1513 1652-1670 1724-1744 5-15 28-36 100-112 119-141 152-175 205-225 236-240 249-268 280-283 334-353 387-393 416-437 626-655 787-793 1251-1266 1275-1285 1355-1366 1509-1513 1652-1661 987-1153 897-1209 88-246 493-586 933-1240 679-778 653-772 885-1044 996-1238 19-30 41-80 332-361 380-391 393-408 611-632 833-849 878-892 1294-1436 1733-1744 1287-1354 1367-1443 4hkqA(179-343) 2e-06 23.35% 4hkqA(85-395) 9e-07 17.67% 4uosA(15-184) 0.0002 16.96% PF03732 3.2e-09 41.2% 1rw3A(139-438) 2e-14 17.3% 2pmaA1(17-125) 4e-09 11.93% b.50.1 1.2e-08 29.0% e.8.1 4.8e-09 32.8% e.8.1 1.4e-41 135.2%

Sequence

MIEPSEDSFETMMELKNPSSKQMESSEGSSNTVEETPGSSGAQAGAQAGAQAEAQAETQV
EAQAEAQAEAQVEAQVEAQAGSDSGPAQEEKEPPSGPLKEMQELPTNLLQEVEEPSSGPH
QEMQELPTDLLQEVEEPSSGPHQEMQELPTDLLREVEEPSSGPYQEMQELPTDLLREVEE
PSSGPYQEMQELPTDLLREVEEPSSGPYQEMQELPTDLLREVEEPSSGPYQEMQELPTDL
LREVEEPSSDPCEASSNDLPQDMEESSDDGSNQESSDGSNHELSNGSNHESSFGSNPESS
DVSNLESSGGSNQESSDGSQKESSYDSNPELSDNSNQELSDNSNQESSDSSNQSSDISNQ
EGSEPLSEASDYSMDETINSSETQSDQDDTDLGDDEEEEEEEGGEEEGQPKNSPEEVVAT
MGNVISLFLRMQDLKEQQRVAERLMMQAINEGRLPSLRPFSGDRRDYHEFVVLCQMTMQN
YPSMLYNDELRVKFVIRHLTDLALEWANDLVEQNSPVINNFSAFLEAMSEKFEYRQTLRV
AEDAMFNIRQGNRCAADYINEFRGLIPTLGWPDEVLQAHLCQGLNEEIRHYLFRIPQPNS
LDNLIVLVLQLEEKLAERRALLRLPPESRPRSVAWMDAPAPEKWRVSSWLPNEFHPDIDR
DHLFLLLLVRVDPYHSVAVRALVDSGAEGNYMDERFAQEHYVELYEKPYPQIIQGVDGIP
IGNEPVWLCTEPLVCVHQKHYEYIEFDILPSPNFSIVLGMKWLRTHAPEVDWMRGRCTFH
SPYCLRNCFTPPPPCIALETYSISLLPGLPHTYSDLADVFNPREADDETSDQPSSDGSDD
LSESEPSELQQAGDSDQSGVFYESGARETLEPVSARMQEKARQQEKAREQEEYWILYDML
TDRQDYTQMVPELFDQLHGAAWFTKLELLGIKESEMRHTVTHTEDTWRASFGFGLHQMRC
YRPFTMNSYSDEGNNIVHFILKDILGLFVICHGREVLVYSMSQEEHSQHVRQVLVRFRYH
NIYCSLDKTQFHRQTAEILGFNISPKGVKLNKNLMNLIVGCPVPGSRRCLQSVIDLVYPY
RHFVENFAVIAAPLVRQLLSSEPYYWGEEEQEALESLKRAFRKSPVLYHPKPQNPFYLET
DITGSFLSASLVQTDDETGKKSTCAFYSRPLSTMEVEYPRVEMRILPIRAAFMVWCRYLE
NTEEPIMILLNTEDLASLNNDRLTVLLPGHWVFFFSHFNFGVMEMPAEGDTQALFRRCWN
QRGFRARFLRPLLLMSIRANLRYFDRSSETEDKEDDEEEEEEDGEEEEGEEEEDGEEEEG
EEEEDGEEEEEEEEDDEEEEGEEEEDGEEEEGEEEEDGEEEEGEEEEDGEEEEGEEEGEE
EEEGEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEDEEEEDEEVPSM
VRELLAAIPMDHILNGLLAHFSVAQIRAVVLNFFRGLLYWKSLLGVAAVLVMLRARQPLS
PVPAPNLEVARPQHRHTLRLILDSTLIASSGMATAIAQLLSQMPPLVGANTLPARELAEL
FLGPRCWHRNALHSQPPRGMRFTPGFWLTLCEFFGVRVNPEDDVFPDPYQHRYLELHVVG
DEDVVLREALQDDLQRYRQCGLHDGLQDTSQDAQDNDVQEDLFGDQEAVTFRPRNLLDPE
VLDFLNNRLLYTLGTDGRLTLLSRDQVAQALTRFLAMASRMALPSPAREQARLEELSDSD
DELD

Region:1-1744
Length:1744aa
Label:Full sequence
Reset:click