Input sequence

Protein name Probable ion channel CASTOR
Organism Oryza sativa subsp.japonica Length 893
Disorder content 20.2% ProS content 8.1%
IDEAL NA UniProt Q75LD5

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 893 1-148 149-194 195-218 219-256 257-264 265-740 741-751 752-893 149-194 219-256 265-740 752-893 1-148 195-218 257-264 13-26 45-52 131-148 195-218 257-264 361-594 363-594 438-595 438-652 527-594 247-347 360-603 17-26 46-92 106-119 205-224 266-286 288-299 265-287 318-340 2aefA(2-208) 7e-07 23.4% 1lnqA(84-291) 1e-14 17.95% PF06241(1-154) 7e-67 79.87% PF06241 2.3e-05 17.1% 1vctA2(13-78) 4e-05 10.29% f.14.1 1.9e-05 18.7% c.2.1 1.6e-13 46.4%

Sequence

MPLDPDSSPAPPHRDWFFPPAPPFLPSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRS
RSRSPLPPPEQQKQQQPPPTTPPPAPRRRDPRYAGVRRGDVRTLTAEKAAAAAAVPTAAQ
VHGSKSAASATTLRWSGMVSVAAIVLCFSSLVRSNSSLHDQVHHLKAQLAEATTKLQSCI
TESSMDMSSILSYQSNNSTSQNRGLKNFSLLLSLSTLYAPLLILKYMDLFLKLRSSQDSE
EEVPINKRLAYRVDIFLSLQPYAKPLVLLVATLLLIGLGGLALYGVNDDSLLDCLWLSWT
FVADSGNHANAEGFGPKLVSVSISIGGMLVFAMMLGLVTDSISEKFDSLRKGRSEVIEQS
HTLVLGWSDKLGSLLNQIAIANESLGGGTIVVMAEKDKEEMEADIAKMEFDLKGTAIICR
SGSPLILADLKKVSVSKARAIVVLAEEGNADQSDARALRTVLSLTGVKEGLRGHIVVELS
DLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQ
LDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDFYVLQEGDEVLVIAEDDDTYAPAP
LPKVMRGYLPKDFVVPKSPERILFCGWRRDMEDMIMVLDAFLAPGSELWMFNDVPEMDRE
RKLIDGGLDFSRLENITLVHREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSR
SLATLLLIRDIQAKRLPFREAMVSHVTRGSFCEGSWIGEMQQASDKSVIISEILDPRTKN
LLSVSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEQGNEMQIRPADLYLREDEEL
NFFEVMLRGRQRKEIVIGYRLVDAERAIINPPDKVSRRRWSAKDVFVVITEKE

Region:1-893
Length:893aa
Label:Full sequence
Reset:click