Input sequence

Protein name CCR4-NOT transcription complex subunit 1
Organism Mus musculus Length 2375
Disorder content 16.0% ProS content 2.3%
IDEAL NA UniProt Q6ZQ08

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR 0 2375 1-5 6-60 61-65 66-163 164-169 170-237 238-243 244-252 253-315 316-326 327-332 333-437 438-441 442-630 631-644 645-659 660-665 666-683 684-689 690-837 838-859 860-863 864-996 997-1067 1068-1312 1313-1365 1366-1479 1480-1484 1485-1582 1583-1617 1618-1625 1626-1633 1634-1796 1797-1801 1802-1814 1815-1818 1819-1841 1842-1864 1865-1870 1871-1915 1916-1927 1928-1950 1951-1956 1957-2232 2233-2237 2238-2361 2362-2375 6-60 66-163 170-237 253-315 333-437 442-630 645-659 666-683 838-859 864-996 1068-1312 1366-1479 1485-1582 1618-1625 1634-1796 1802-1814 1842-1864 1871-1915 1928-1950 1957-2232 2238-2361 1-5 238-243 316-326 631-644 690-837 997-1067 1313-1365 1583-1617 1819-1841 2362-2375 1-5 238-243 320-326 641-644 690-695 830-837 1352-1359 1608-1617 1841-2360 1355-1603 1092-1316 826-1003 1841-2360 1354-1587 1072-1298 826-1003 451-613 2011-2356 1995-2375 181-189 687-698 767-797 1015-1032 1035-1059 1113-1124 1300-1312 1332-1349 1489-1496 1638-1652 4cqoA(1-510) 0.0 98.08% 4cruA(6-242) 2e-126 95.18% 4crwA(2-226) 2e-107 99.56% 4j8sA(3-180) 3e-103 99.44% 4cqoA(1-510) 0.0 98.08% 4cruA(5-238) 8e-87 99.57% 4b89A(8-226) 2e-68 38.77% 4j8sA(3-180) 1e-67 99.44% 4b8bA(138-295) 3e-09 16.27% PF04054(9-354) 5e-147 70.86% PF04054 1.8e-294 988.8%

Sequence

MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSPDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRPWKHAEGQLSFIQHSLINPEVFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPAETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPGGL
GTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHFS
KEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRF
FPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRF
KNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQ
AQAQVPAKAPLAGQVNTMVTTSTTTTVAKTVTVTKPTGVSFKKDVPPSINTTNIDTLLVA
TDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSI
EPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGM
ITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVFRPPNPWTMA
IMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKK
DVKQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTIP
LFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAA
HHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNCE
LACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKV
GGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELEQ
HLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLL
LRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQ
YDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRGN
APEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVN
LYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNP
AANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVR
QSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLEL
ISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLV
LLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIA
PRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVLY
VGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHT
HYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHE
FVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS

Region:1-2375
Length:2375aa
Label:Full sequence
Reset:click