Input sequence

Protein name Cadherin-5
Organism Bos taurus Length 783
Disorder content 13.5% ProS content 10.0%
IDEAL NA UniProt Q6URK6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 783 1-4 5-27 28-39 40-620 621-658 659-664 665-693 694-699 700-736 737-753 754-777 778-783 5-27 40-620 659-664 700-736 754-777 1-4 28-39 621-658 665-693 737-753 778-783 1-4 621-625 634-658 665-693 737-745 778-783 47-362 207-590 679-774 46-576 700-774 637-774 157-246 262-339 486-575 50-140 154-247 261-363 376-469 482-576 621-776 91-519 472-581 46-141 142-248 249-365 368-471 472-586 7-25 604-625 741-755 5-27 598-620 2a62A(2-318) 8e-65 42.19% 3q2wA(60-451) 1e-22 26.96% 3ifqC(5-88) 2e-09 40.62% 3q2wA(1-541) 9e-91 29.53% 1i7xD(5-63) 3e-10 40.0% PF01049(16-139) 5e-16 45.65% PF00028(4-91) 4e-06 41.3% PF00028(2-75) 0.0003 35.9% PF00028(5-91) 0.0004 36.67% PF00028 5.9e-14 57.0% PF00028 5e-22 83.8% PF00028 1.2e-30 112.4% PF00028 1.6e-19 75.5% PF00028 3.7e-10 44.4% PF01049 3.9e-78 270.1% 1dnvA(6-400) 3e-50 7.39% 1l3wA5(1-102) 2e-14 18.02% b.1.6 3e-12 42.7% b.1.6 8.7e-24 84.7% b.1.6 3.7e-24 89.3% b.1.6 3.2e-16 58.2% b.1.6 5.6e-26 83.2%

Sequence

MQALVMLLATGATYYLGLLAAAAAAVNPGRPNTPGSLPAHRRQKRDWIWNQMHIDEERND
SLPHYVGKIKSSVDPKKTEYQLRGESAGKVFRVDKNTGDVYALERLDREKISEYHLTALV
VDKDSKKNLESPSSFTIKVHDVNDNWPVFTHRVFNASVPEMSGIGTSVIQVTAMDADDPT
VADHASVVYQLTKGKENFDIRGSGLIVTMNKHLDRETQDKYEVVVKAEDAQGRRGESGTA
TVFITLQDVNDNFPIFTQNRYTFSVPEDIRVGSPLGSLFVEDPDEPQNRKTKYSFVQGEY
RDTFTIDTDPSHNEGIIKPIKPLDYERIRQYSFTIEATDPTIDLRYLGSTSPKNIARVII
NVTDVDEPPIFQQPFYHFQLQENQKKPLIGSVLAKDPDAAQRDIRYSIRRTSDKGQFFGI
TKKGGIYNDKELDREVYPWYNLTVEAKEVDLSGTPTGKESIVQVHIEVMDENDNAPEFAK
PYEPKVCENAPQGKLVVQISATDKDITPRDVKFKFSLSTEDSNFTLIDNHDNTANIIVKY
GYFDRERAKVHHLPVLISDNGRPSLTGTSTLHVTVCKCNEHGEFTLCEEAAAQVGISIQA
LVAIFLCILTFTVITLLIILRRRLRKQARAHGKSVPEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSARHGGAKPPRPALDARPSLYAQVQKPPRQAPGAHAPGEMAAMIGVKKDEADHDGG
GPPYDTLHIYGYEGAESIAESLSSLGTDSSDSDIDYDFLNDWGTRFKMLAELYGSDPQEE
LVY

Region:1-783
Length:783aa
Label:Full sequence
Reset:click