Input sequence

Protein name Transient receptor potential cation channel subfamily A member 1
Organism Rattus norvegicus Length 1125
Disorder content 6.8% ProS content 5.6%
IDEAL NA UniProt Q6RI86

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1125 1-5 6-1016 1017-1039 1040-1077 1078-1125 6-1016 1040-1077 1-5 1017-1039 1078-1125 1-5 1017-1028 1036-1039 1078-1094 1101-1125 450-1080 26-588 68-596 450-1080 99-373 242-575 42-151 713-962 98-130 165-197 239-271 309-341 342-374 413-445 482-513 548-580 778-963 101-520 42-151 450-597 548-723 32-382 302-507 411-657 438-449 767-789 810-827 831-853 873-895 943-965 3j9pD(4-560) 0.0 65.13% 4rlvA(45-580) 9e-38 28.7% 4rlvA(120-717) 7e-36 25.28% 3j9pD(4-560) 3e-179 64.98% 1wdyA(5-283) 5e-58 26.43% 1wdyA(7-279) 2e-52 20.35% 4tumA(11-118) 1e-19 32.43% PF08016(90-356) 2e-07 23.59% PF00023 5.3e-12 50.5% PF00023 0.00011 26.1% PF00023 5e-05 27.3% PF00023 5.8e-06 30.4% PF00023 8.6e-06 29.9% PF00023 2.9e-05 28.1% PF00023 5.8e-06 30.4% PF00023 2.2e-06 31.8% PF00520 6.9e-06 30.2% 1n11A(2-401) 1e-42 27.79% 1ot8A(101-208) 8e-12 21.82% 1awcB(5-149) 2e-19 26.67% 1iknD(1-179) 9e-07 13.26% d.211.1 4.6e-75 244.3% d.211.1 1.5e-43 144.9% d.211.1 3.2e-41 133.2%

Sequence

MKRSLRRVLRPEERKEVQGVVYRGVGKDMDCSKESFKVDIEGDMCRLEAFIKNRRKLSKY
EDENLCLLHHAAAEGQVELMQLIINGSSCEALNVMDDYGNTPLHWAAEKNQVESVKFLLS
QGANPNLRNRNMMAPLHIAVQGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSE
ALQILLEKGAKLCKSNKWGDYPVHQAAFSGAKRCMELILAYGEKTGYSREAHINFVNHKK
ASPLHLAVQSGDLDMIKMCLDSGAHIDMMENAKCMALHFAATQGATDIVKLMISSYTGSS
DIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLSKGAKVDIKDHLGRNFLHLTVQQPYGLRNLRPEFLQMQHIKELVMDEDNDGCTPLHY
ACRQGAPVSVNNLLRFNVSVHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLK
CTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQASFLHIALHNKRKEVVLTT
IRSKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYN
FKYLQCPLSMTKKVTPTQDVIYEPLTILNVMVQHNRIELLNHPVCREYLLMKWCAYGFRA
HMMNLGSYCLGLIPMTLLVVKIQPGMAFNSTGIINETISTHEERINTLNSFPLKICMILV
FLSSIFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSMIFVLPLFLDIPAYMQWQCGAI
AIFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNFQDA
FSTPLLSLIQTFSMMLGDINYRDAFLEPLFRNELAYPVLTFGQLIAFTMFVPIVLMNLLI
GLAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPFWYLRKVDQRSTIVYPNRPRHGRMLR
FFHYFLSMQETRQEAPNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISET
EDEDNHCSFQDRFKKERLEQMHSKWNFVLNAVKTKTHCSISHPDI

Region:1-1125
Length:1125aa
Label:Full sequence
Reset:click