Input sequence

Protein name Sodium channel protein type 10 subunit alpha
Organism Mus musculus Length 1958
Disorder content 25.9% ProS content 16.6%
IDEAL NA UniProt Q6QIY3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1958 1-11 12-20 21-68 69-437 438-620 621-895 896-903 904-934 935-1109 1110-1822 1823-1826 1827-1880 1881-1958 12-20 69-437 621-895 904-934 1110-1822 1827-1880 1-11 21-68 438-620 896-903 935-1109 1823-1826 1881-1958 1-11 21-34 51-68 438-544 563-576 593-620 935-938 948-976 983-1012 1084-1095 1881-1909 1916-1936 1944-1952 1727-1872 1432-1452 1727-1872 1432-1452 156-395 1191-1418 700-858 1516-1722 1078-1163 155-395 698-888 903-1163 1189-1418 1511-1722 659-764 1472-1548 1149-1235 169-268 114-404 664-892 1111-1427 1464-1750 405-420 557-572 791-803 870-894 1002-1015 1103-1114 1249-1264 1399-1409 1549-1566 1572-1591 400-437 128-147 160-179 189-206 219-241 246-268 374-396 696-718 782-804 867-889 1153-1172 1192-1211 1218-1240 1282-1304 1354-1376 1396-1418 1473-1495 1510-1532 1539-1561 1611-1633 1698-1720 4dckA(1-146) 3e-59 76.03% 1byyA(1-21) 8e-05 100.0% 4dckA(1-146) 2e-46 76.03% 1byyA(1-21) 5e-06 100.0% PF00520(2-198) 8e-29 31.3% PF00520(3-198) 4e-27 39.91% PF00520(3-169) 3e-14 35.93% PF00520(6-198) 6e-13 33.94% PF06512(134-219) 1e-13 46.51% PF00520 8.8e-72 249.1% PF00520 6.6e-51 179.7% PF06512 4.4e-106 363.0% PF00520 2e-69 241.2% PF00520 1.2e-59 208.8% 1orsC(1-104) 2e-14 14.02% 1orsC(1-78) 7e-14 12.82% 1orsC(2-86) 1e-09 12.64% 2e9xC1(1-102) 6e-12 12.5% f.14.1 2.8e-29 101.7% f.14.1 4.1e-24 83.7% f.14.1 3.2e-38 132.8% f.14.1 1.8e-35 123.2%

Sequence

MEFPFGSVGTTNFRRFTPESLAEIEKQIAAHRAAKKGRPKQRGQKDKSEKPRPQLDLKAC
NQLPRFYGELPAELVGEPLEDLDPFYSTHRTFIVLDKSRTISRFSATWALWLFSPFNLIR
RTAIKVSVHSWFSIFITVTILVNCVCMTRTDLPEKLEYAFTVVYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIKNGTDPHKADNLSSEMAGDIFIK
PGTTDPLLCGNGSDAGHCPNDYVCRKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDSWERL
YQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQSQATIAEIEAKEKKFKEA
LEVLQKEQEVLAALGIDTTSLYSHNGSPLAPKNANERRPRVKSRMSEGSTDDNRSLQSDP
YNQRRMSFLGLSSGRRRASHSSVFHFRAPSQDVSFPDGILDDGVFHGDQESRRSSILLGR
GAGQAGPLPRSPLPQSPNPGPRRGEEGQRGVPTGELATGAPEGPALDAAGQKNFLSADYL
NEPFRAQRAMSVVSIMTSVIEELEESKLKCPPCLISLAQKYLIWECCPKWKKFKMVLFEL
VTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIVFTVFFTMEMAFKIIAFDP
YYYFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFRLLRVFKLAKSWPTLNMLIKIIG
NSVGALGNLTFILAIIVFIFALVGKQLLSENYGCRRDGISVWNGERLRWHMCDFFHSFLV
VFRILCGEWIENMWVCMEVSQDYICLTLFLTVMVLGNLVVLNLFIALLLNSFSADNLTAP
EDDGEVNNLQVALARIQVFGHRASRAITSYIRSHCRLRWPKVETQLGMKPPLTSCKAENH
IATDAVNAAVGNLAKPALGGPKENHGDFITDPNVWVSVPIAEGESDLDELEEDVEHASQS
SWQEESPKGQQELLQQVQKCEDHQAARSPPSGMSSEDLAPYLGERWQREESPRVPAEGVD
DTSSSEGSTVDCPDPEEILRKIPELAEELDEPDDCFPEGCTRRCPCCKVNTSKFPWATGW
QVRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVF
EMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLR
ALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSRCVDTRSNPFS
VVNSTFVTNKSDCYNQNNTGHFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDS
RDINSQPNWEESLYMYLYFVVFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMALICLNMITMMVETDN
QSEEKTKVLGRINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVILSISSLLFSAI
LSSLESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYSIFGMASFANVIDEAGIDDMFNFKTFGNSMLCLFQITTSAGWDGLLSPILNTGPPYCD
PNRPNSNGSKGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSED
DFDMFYETWEKFDPEATQFIAFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKIH
CLDILFAFTKNVLGESGELDSLKTNMEEKFMATNLSKASYEPIATTLRCKQEDISATIIQ
KAYRNYMLQRSLMLSNPLHVPRAEEDGVSLPREGYVTFMANDNGGLPDKSETASATSFPP
SYDSVTRGLSDRANISTSSSMQNEDEVTAKEGKSPGPQ

Region:1-1958
Length:1958aa
Label:Full sequence
Reset:click