Input sequence

Protein name Calsyntenin-1
Organism Rattus norvegicus Length 952
Disorder content 13.7% ProS content 6.8%
IDEAL NA UniProt Q6Q0N0

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 952 1-11 12-664 665-682 683-786 787-830 831-853 854-885 886-927 928-952 12-664 683-786 831-853 886-927 1-11 665-682 787-830 854-885 928-952 1-11 665-674 854-857 863-885 936-952 98-236 31-248 332-504 159-248 323-534 91-247 32-146 31-146 301-534 2-29 825-843 890-928 886-927 12-29 831-853 2wcpA(63-192) 2e-06 29.79% 2a62A(99-319) 8e-20 24.79% 3v0aB(814-977) 2e-13 15.43% PF00028 2.7e-05 28.2% 1epwA1(11-217) 4e-18 10.19% 1o75A3(9-166) 8e-18 14.04% 1edhA2(1-112) 2e-06 22.69% b.1.6 3.6e-12 45.7% b.29.1 4.2e-41 126.3%

Sequence

MLRRPAPALARAVRLLLAGLLYGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDSPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQA
YDCGKGPDGTGVKKSHKATVHIQVNDVNEYAPVFKEKSYKAAVVEGKQHGSILRVEAVDA
DCSPQFSQICSYEILTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRATED
VLVKISVKPTCSPGWQGWSSRIEYEPGTGALAVFPSIHLETCDEPVASVQATVELETSHI
GKGCDRDTYSEKSLHRLCGAAAGTSELLPSPSSSFNWTVGLPTDNGHDSDQVFEFNGTQA
VRIPDGVVTLDPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFL
LRQDPSEEKKYRPAEFHWKLNQVCDEDWHHFVLNVEVPSVTLYVDGVSHEPFSVTEDYPL
HPTKIETQLVVGACWQGGDLHMTQFFRGNLAGLTVRSGKLADKKVIDCLYTCKEGLDLQV
PEDGNRGVQIQTSSSQAVLTLEGENVGELDKAMQHISYLNSRQFPTPGIRRLKITSTVKC
FNEAACIEVPPVEGYVMVLQPEEPKISLSGVHHFARAASEFESPEGVSLFPELKIISTIT
REVEPEADGAEDPTVQESLVSEEIVHDLDTCEVTVEGEELNAEQESLEVDVARLQQKGIE
VNHSDLGVVFTGVETMASYEEVLHLLRYRNWHTRSLLDRKFKLICSELNGRYLSNEFKVE
VNVIHTANPVEHANHMAAQPQFVHPEHRSFVDLSGHNLASPHPFAVVPSTATVVIVVCVS
FLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEE
EEEEEESEDGEEEEDITSAESESSEEEEGGPGDGQNTTRQQQLEWDYSTLSY

Region:1-952
Length:952aa
Label:Full sequence
Reset:click