Input sequence

Protein name Occludin
Organism Rattus norvegicus Length 523
Disorder content 37.3% ProS content 22.6%
IDEAL NA UniProt Q6P6T5

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 523 1-39 40-124 125-127 128-220 221-225 226-267 268-414 415-517 518-523 40-124 128-220 226-267 415-517 1-39 125-127 268-414 518-523 4-28 125-127 268-317 340-352 367-379 398-405 518-523 417-523 417-523 421-520 57-269 421-520 408-521 106-131 251-265 430-488 67-89 102-124 139-161 173-195 243-265 1wpaA(1-107) 9e-54 91.59% 1wpaA(1-107) 1e-38 91.59% PF07303(1-102) 1e-18 50.96% PF01284 6.9e-47 166.4% PF07303 1.1e-54 192.3% 1hciA3(12-113) 8e-05 14.91%

Sequence

MSVRPFESPPPYRPDEFKPNHYAPSNDMYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVIVMCIAVFACVASTLAWDRAYGTGIFGGSMNYPYGSGFGSYGGGFGGY
GYGYGYGYGGYTDPRAAKGFLLAMAAFCFIASLVIFVTSVIRSGMSRTRRYYLIVIIVSA
ILGIMVFIATIVYIMGVNPTAQASGSMYGSQIYTICSQFYTPGGTGLYVDQYLYHYCVVD
PQEAIAIVLGFMIIVAFALIIVFAVKTRRKMDRYDKSNILWDKEHIYDEQPPNVEEWVKN
VSAGTQDMPPPPSDYAERVDSPMAYSSNGKVNGKRSYPDSLYKSPPLVPEVAQEIPLTLS
VDDFRQPRYSSNDNLETPSKRTPTKGKAGKAKRTDPDHYETDYTTGGESCDELEEDWLRE
YPPITSDQQRQLYKRNFDAGLQEYKSLLAELDEVNKELSRLDRELDDYREESEEYMAAAD
EYNRLKQVKGSADYKSKKNYCKQLKSKLSHIKRMVGDYDRRKT

Region:1-523
Length:523aa
Label:Full sequence
Reset:click