Input sequence

Protein name ERAD-associated E3 ubiquitin-protein ligase HRD1B
Organism Arabidopsis thaliana Length 460
Disorder content 28.0% ProS content 15.7%
IDEAL NA UniProt Q6NPT7

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 460 1-135 136-140 141-336 337-460 1-135 141-336 136-140 337-460 136-140 378-402 414-418 424-460 280-330 280-331 292-329 292-329 285-331 269-333 42-57 353-375 387-393 7-24 44-66 99-121 141-160 173-195 224-246 2lxhC(3-53) 2e-14 62.75% 2lxhC(3-54) 2e-19 61.54% PF00097(1-43) 2e-05 51.16% PF00097 1.2e-10 45.9% 1chcA(1-48) 1e-11 27.08% g.44.1 1.1e-17 59.3%

Sequence

MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL
VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA
QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM
ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG
LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT
SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT
SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQT
EVEAQRRFLESQIEVLTNQLRLLEKPTTVDTKGKSVADTA

Region:1-460
Length:460aa
Label:Full sequence
Reset:click