Input sequence

Protein name E3 ubiquitin ligase TRIM40
Organism Rattus norvegicus Length 247
Disorder content 5.3% ProS content 5.3%
IDEAL NA UniProt Q6MFY8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 247 1-42 43-47 48-234 235-247 1-42 48-234 235-247 235-247 12-57 69-148 12-59 12-54 5-100 7-81 67-105 155-167 113-147 2ecwA(22-68) 1e-08 51.06% 4tn3A(4-85) 8e-06 28.05% 2egpA(15-64) 4e-11 46.0% PF00097 2.2e-12 51.7% 1jm7A(17-103) 9e-08 26.04% g.44.1 1.1e-13 46.0% g.43.1 2.5e-07 28.5%

Sequence

MVPLDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKPCSE
TVLGDNYICHTHQKRVCRFCESSRHLLCEECLQSPEHRAHTELSIENAISHYKERLNRRS
RKLRKDLGDLQRLKAQEEKMLQALQVDWGSHRPRTEQQNQDQTELQQKALPRHWLDQRED
PPEEVAKVFNFSEAVTQLSILVSSLERMAKELDASTLKDASDLLDRSSQQKLEGLLSHVP
PANSKLS

Region:1-247
Length:247aa
Label:Full sequence
Reset:click