Input sequence

Protein name Protocadherin-11 X-linked
Organism Sus scrofa Length 1117
Disorder content 24.9% ProS content 20.9%
IDEAL NA UniProt Q6KEQ9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1117 1-19 20-791 792-812 813-835 836-906 907-946 947-964 965-968 969-1117 20-791 813-835 907-946 965-968 1-19 792-812 836-906 947-964 969-1117 1-19 792-801 807-812 836-865 880-906 947-964 969-1037 1051-1074 1083-1113 186-661 35-336 616-759 143-663 28-241 577-760 775-977 471-561 579-664 254-346 685-759 144-239 24-114 24-116 144-240 254-346 366-457 471-561 575-664 680-773 775-1002 205-622 71-321 581-738 9-97 133-241 237-395 349-458 460-562 564-665 667-774 762-773 813-828 868-876 978-996 813-835 3q2vA(49-527) 4e-36 27.08% 2a62A(16-300) 5e-20 27.39% 4nupA(53-201) 6e-08 30.26% 3q2wA(3-540) 2e-77 25.76% 3ppeA(7-203) 1e-17 23.66% 3k5sA(7-202) 5e-26 25.63% PF08374(1-195) 3e-39 52.68% PF00028(1-92) 1e-12 48.91% PF00028(5-92) 7e-09 48.86% PF00028(1-90) 1e-08 40.86% PF00028(5-79) 3e-06 42.67% PF00028(1-91) 0.0001 33.33% PF08266(1-82) 5e-09 37.36% PF08266 2e-05 -1.4% PF00028 7.3e-09 40.0% PF00028 2.2e-23 88.3% PF00028 6.3e-07 33.6% PF00028 5.3e-21 80.4% PF00028 1.3e-23 89.1% PF00028 1.5e-10 45.7% PF08374 2.5e-153 519.9% 1dnvA(14-412) 2e-53 8.41% 2nlzA1(308-530) 9e-23 8.95% 1f15A(1-154) 8e-32 13.75% 1f5aA1(38-114) 9e-07 12.36% b.1.6 1.9e-23 82.0% b.1.6 1.5e-34 119.2% b.1.6 2.3e-18 64.5% b.1.6 4.8e-31 108.1% b.1.6 1.2e-29 103.3% b.1.6 1.4e-20 72.1%

Sequence

MDLLSGTHIFAVLLACIVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDRSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVVDAHCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPDTGINGVQNYHLIK
GQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFKENEIEVSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLF
HLNSTTGLITIKEPLDREESPNHKLLVLASDGGLTPARAMVLVNVTDINDNIPSIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADHNGWVSCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNS
PGTQLTKISAMDADSGRNAEINYLLGFDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTV
LAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVILSILDANDDFTIDPQTGVIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVT
INVVDVNDNKPVFVVPSSNYSFELVPPSTNPGTVVFTVVAIDNDTGMNAELRYSMVGGNT
KGLFIIDQTSGNITLKEKCVFADLGLHRLVVKAKDLGQPDSLFNVVNVNLFVNESVTNAT
LIYELVRKNIETPVTQNIETTDASSPSSDYVKIVVAIVAGTITVILVIFITAVVRCQQSP
HLKAAQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKHAPKNLLLNFVTIEEAKADGADNN
RSSITLDLPIELEEQTMGKYNWGTTPTTFKPDSADLARHYKSASPQPTFQIQPETPLNSK
HHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRPPMKEAIRF
HTPMKETTTVEIWTHPQPQRKSEGKRAGKSQRRVTFHLPEGSQESSSDGGLGDHDTGSLP
STSHALPLGYPQEEYFDHAAPNNRTEGDGNSDPESGK

Region:1-1117
Length:1117aa
Label:Full sequence
Reset:click