Input sequence

Protein name Squamosa promoter-binding-like protein 9
Organism Oryza sativa subsp.japonica Length 842
Disorder content 38.7% ProS content 23.0%
IDEAL NA UniProt Q6I576

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 842 1-20 21-29 30-38 39-48 49-168 169-235 236-359 360-391 392-396 397-528 529-538 539-598 599-608 609-632 633-636 637-748 749-754 755-777 778-800 801-842 21-29 39-48 169-235 360-391 397-528 539-598 609-632 637-748 755-777 801-842 1-20 30-38 49-168 236-359 529-538 599-608 633-636 749-754 778-800 1-7 18-20 30-38 49-51 92-133 236-241 264-325 351-359 529-538 599-608 633-636 749-754 778-800 170-250 170-231 170-231 170-248 171-231 168-253 5-16 52-85 137-164 232-245 805-818 801-823 1ul5A(3-83) 3e-25 79.01% 1ul5A(3-64) 2e-15 79.03% PF03110(1-62) 1e-16 53.23% PF03110 9.4e-43 152.6% 1ul4A(4-64) 9e-13 57.38% g.72.1 1.3e-35 117.3%

Sequence

MDAPGGGGGGGGGGGGVDAGEPVWDWGNLLDFAVHDDDSLVLPWGDDSIGIEADPAEAAL
LPPAPSPQPAEAEAEAAGPASLPSSMQAEGSKRRVRKRDPRLVCPNYLAGRVPCACPEID
EMAAALEVEDVATELLAGARKKPKGAGRGSGAAVGGSGGGASRGTPAEMKCQVPGCEADI
RELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNK
RRRRKPDSKGILEKDIDDQLDFSADGSGDGELREENIDVTTSETLETVLSNKVLDRETPV
GSDDVLSSPTCAQPSLQIDQSKSLVTFAASVEACLGTKQENTKLTNSPVHDTKSTYSSSC
PTGRVSFKLYDWNPAEFPRRLRHQIFEWLSSMPVELEGYIRPGCTILTVFVAMPQHMWDK
LSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRLEVQSPRIHYVH
PSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLKHDCRRILSHETFDCIGSGEHILDS
QHEIFRINITTSKLDTHGPAFVEVENMFGLSNFVPILVGSKHLCSELEQIHDALCGSSDI
SSDPCELRGLRQTAMLGFLIDIGWLIRKPSIDEFQNLLSLANIQRWICMMKFLIQNDFIN
VLEIIVNSLDNIIGSELLSNLEKGRLENHVTEFLGYVSEARNIVDNRPKYDKQRQVDTRW
AGDYAPNQPKLGISVPLAESTGTSGEHDLHSTNAASGEEENMPLVTKALPHRQCCHPETS
ARWLNAASIGAFPGGAMRMRLATTVVIGAVVCFAACVVLFHPHRVGVLAAPVKRYLSRNY
SS

Region:1-842
Length:842aa
Label:Full sequence
Reset:click