Input sequence

Protein name RNA polymerase-associated protein CTR9 homolog
Organism Xenopus tropicalis Length 1172
Disorder content 23.9% ProS content 1.0%
IDEAL NA UniProt Q6DEU9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1172 1-892 893-1172 1-892 893-1172 893-893 920-924 1018-1023 502-767 347-573 128-440 347-764 33-466 1044-1169 163-196 198-231 341-374 451-484 531-564 347-764 44-424 771-851 131-483 450-761 232-241 321-338 852-878 904-914 935-978 987-1004 1011-1036 821-892 1w3bA(72-355) 9e-12 25.17% 1w3bA(141-381) 3e-09 23.6% 1w3bA(62-368) 0.0004 21.38% 1w3bA(5-386) 1e-38 20.29% 1w3bA(25-388) 3e-15 16.32% PF05756(15-169) 7e-05 27.56% PF07719 8e-05 26.6% PF00515 4.4e-05 27.5% PF07719 1.9e-05 28.7% PF07719 0.00098 23.0% PF00515 1.1e-05 29.5% 1w3bA(5-386) 9e-28 19.81% 1w3bA(2-385) 4e-17 14.14% 1nigA(2-84) 2e-11 24.14% a.118.8 2e-46 161.3% a.118.18 7.1e-37 125.8%

Sequence

MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALGLEYYKQVKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAGVRLGMGHCFVKLNKLDKARLAFGRALDLNPTCVGALVGLAV
LELNNKEADSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFAAASFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTTYNLARLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYVREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQILLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
NAVKELELAHRYFNYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQEKEILRQKLIKEQEEKRLKEIEEQKKLLEQRAQYVEKTRNLLNFTGEMETPKE
KKQRGGGGGGGGRRSKKNGEFDEFVNDDSDEDLAPRKKKRKKGGGSSGSGGEQGEGGEEG
EGGEKKKKKRRKRPQKGGDGSDDDEDQAPQPKKRQPKKREKPAKFERTPPSMKGKIKSKA
IISSSEDDSDEDKLKIADEGHGRGSNSDSDEGPRTQAKKRIMSDSDSDNANKSGSGAGSP
QKSPQSDGDSDNNAWARKRRRQDSGSDNDSAQSRRSSGGSDNESRAASRSPESQRGSDRG
SDNEGSARASPNESEQEASNNEKSDRGSDDSD

Region:1-1172
Length:1172aa
Label:Full sequence
Reset:click