Input sequence

Protein name Junctional adhesion molecule C
Organism Rattus norvegicus Length 310
Disorder content 23.9% ProS content 10.0%
IDEAL NA UniProt Q68FQ2

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 310 1-28 29-180 181-184 185-192 193-272 273-310 29-180 193-272 1-28 185-192 273-310 9-28 300-310 43-241 31-230 147-228 31-136 153-221 137-238 35-140 33-160 131-231 3-15 18-24 242-259 245-267 1f97A(13-204) 3e-28 37.0% 1nbqA(4-199) 4e-38 32.5% PF07679(6-81) 8e-11 44.05% PF07686 1.6e-07 35.6% PF00047 2.5e-09 41.6% 1bqsA1(6-90) 3e-12 18.63% 1olzA1(1-89) 5e-08 19.81% b.1.1 4e-16 46.2% b.1.1 1.5e-22 65.8%

Sequence

MALSRRLRLRLCARLPDFFLLLLFRGCVIEAVNLKSSNRNPVVHEFESVELSCIITDSQT
NDPRIEWKKIQDGQTTYVYFDNKIQGDLAGRTDVFGKTSLRIWNVTRSDSAIYRCEVVAL
NDRKEVDELTIELIVQVKPVAPVCRVPKAVPVGKAATLQCQESEGYPRPYYSWYRNDVPL
PTDSRANPRFQNSSFHVNSETGTLVFSAVHKEDSGQYYCIASNDAGAARCEGQDMEVYDL
NIAGIIGGVLVVLIVLAVITMGICCAYRRGCFISSKQDGESYKSPGKHEGVNYIRTSEEG
DFRHKSSFVI

Region:1-310
Length:310aa
Label:Full sequence
Reset:click