Input sequence

Protein name Cyclic nucleotide-gated cation channel alpha-4
Organism Rattus norvegicus Length 575
Disorder content 14.3% ProS content 3.8%
IDEAL NA UniProt Q64359

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 575 1-19 20-477 478-489 490-524 525-575 20-477 490-524 1-19 478-489 525-575 2-5 478-481 525-538 286-466 364-474 163-402 367-456 71-265 366-459 273-474 139-269 28-274 273-472 72-83 500-508 514-523 540-557 490-524 33-52 174-196 248-270 4d7sA(14-188) 5e-27 30.39% 4chvA(245-341) 2e-27 26.13% 16vpA(67-307) 1e-23 4.98% PF00027(2-88) 6e-09 37.63% PF00520 1.4e-22 85.6% PF00027 3.7e-22 84.2% 1q3eA(1-192) 8e-27 26.73% 1p7bA2(4-114) 3e-10 12.88% f.14.1 4.9e-30 104.3% b.82.3 2.2e-39 137.1%

Sequence

MSQDGKVKTTESTPPAPTKARKWLPVLDPSGDYYYWWLNTMVFPIMYNLIIVVCRACFPD
LQHSYLVAWFVLDYTSDLLYLLDIGVRFHTGFLEQGILVVDKGMIASRYVRTWSFLLDLA
SLVPTDAAYVQLGPHIPTLRLNRFLRVPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI
HWNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPLPDR
EEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNKRLE
RRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEEL
VLKLQPQTYSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYAVLGAGLYFGEISIIN
IKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQAVMEEKGREILLKMNKLDV
NAEAAEIALQEATESRLKGLDQQLDDLQTKFARLLAELESSALKIAYRIERLEWQTREWP
MPEDMGEADDEAEPGEGTSKDGEGKAGQAGPSGIE

Region:1-575
Length:575aa
Label:Full sequence
Reset:click