Input sequence

Protein name Collagen alpha-1(VII) chain
Organism Mus musculus Length 2944
Disorder content 53.5% ProS content 51.9%
IDEAL NA UniProt Q63870

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 2944 1-27 28-218 219-223 224-366 367-372 373-408 409-419 420-491 492-498 499-510 511-594 595-599 600-904 905-908 909-953 954-959 960-992 993-1094 1095-1125 1126-1132 1133-1147 1148-1185 1186-1222 1223-1247 1248-1357 1358-1626 1627-1688 1689-1860 1861-1870 1871-1874 1875-1880 1881-2557 2558-2583 2584-2622 2623-2630 2631-2660 2661-2667 2668-2814 2815-2901 2902-2909 2910-2934 2935-2944 28-218 224-366 373-408 420-491 511-594 600-904 909-953 960-992 1095-1125 1133-1147 1186-1222 1248-1357 1627-1688 1861-1870 1875-1880 2558-2583 2623-2630 2661-2667 2815-2901 2910-2934 1-27 367-372 409-419 499-510 993-1094 1126-1132 1148-1185 1223-1247 1358-1626 1689-1860 1871-1874 1881-2557 2584-2622 2631-2660 2668-2814 2935-2944 1-19 409-414 499-504 993-998 1011-1079 1084-1090 1126-1132 1148-1185 1223-1247 1358-1626 1689-1860 1871-1874 1881-2557 2584-2622 2631-2660 2668-2814 2935-2940 236-477 509-858 686-1032 38-217 1055-1205 2876-2933 37-219 1052-1235 236-414 875-1046 2877-2933 686-953 514-768 2601-2681 413-607 39-188 1055-1207 2879-2931 39-212 233-320 328-408 415-494 509-588 599-678 687-766 776-854 868-947 955-1039 1055-1230 1264-1323 1330-1389 1390-1448 1451-1510 1511-1571 1580-1639 1643-1702 1714-1772 1773-1832 1833-1892 1973-2033 2034-2093 2099-2158 2165-2223 2233-2292 2321-2379 2386-2445 2457-2516 2530-2589 2590-2649 2659-2718 2719-2777 2878-2932 37-218 1052-1235 2877-2931 249-328 973-1038 790-980 678-785 510-607 590-686 334-415 2477-2687 32-224 231-329 333-415 411-503 495-604 594-684 686-772 776-863 850-960 950-1047 1049-1236 2875-2931 2-13 478-493 862-874 1263-1286 1300-1321 1327-1393 1397-1414 1419-1472 1507-1561 1572-1595 1604-1632 1652-1667 1688-1703 1722-1734 1776-1794 1803-1833 1872-1901 1968-1988 2003-2083 2108-2126 2174-2193 2195-2242 2245-2321 2326-2351 2360-2380 2383-2398 2413-2446 2454-2475 2493-2512 2575-2594 2689-2731 2745-2775 1fnhA(3-243) 8e-17 26.4% 1fnfA(2-358) 7e-16 25.75% 3t1wA(1-350) 2e-16 24.73% 4cn9A(9-197) 2e-14 32.98% 4igiA(3-153) 7e-08 26.32% 1kthA(2-57) 6e-12 48.28% 1lfaA(2-182) 1e-42 22.7% 1lfaA(1-180) 7e-14 11.7% 1qr4A(3-175) 1e-23 24.44% 1qr4A(7-174) 2e-16 22.41% 1ld6A(3-57) 9e-18 35.09% 4gh7B(1-275) 3e-17 22.3% 1tdqA(9-268) 8e-14 20.53% 2pneA(2-80) 5e-08 38.27% 4hljA(12-222) 3e-05 20.38% PF00092(1-148) 2e-14 36.08% PF00092(1-150) 7e-10 33.13% PF00014(2-52) 7e-10 52.83% PF00092 6.3e-57 199.7% PF00041 5.6e-19 73.7% PF00041 1e-07 36.2% PF00041 4.1e-08 37.6% PF00041 4.8e-07 34.0% PF00041 1.9e-06 32.0% PF00041 1.7e-13 55.4% PF00041 2.5e-09 41.6% PF00041 9.3e-12 49.7% PF00041 1.9e-07 35.3% PF00092 5.5e-24 90.3% PF01391 1.4e-11 49.1% PF01391 1.1e-08 39.4% PF01391 6e-05 11.3% PF01391 1.2e-12 52.7% PF01391 3.4e-05 15.8% PF01391 3.3e-12 51.2% PF01391 1.7e-14 58.7% PF01391 1.1e-11 49.4% PF01391 3.9e-12 50.9% PF01391 3.9e-11 47.6% PF01391 6.6e-06 29.1% PF01391 1.5e-08 39.0% PF01391 3.9e-15 60.9% PF01391 6.9e-06 28.7% PF01391 1.2e-13 56.0% PF01391 1.2e-05 24.0% PF01391 2.8e-11 48.1% PF01391 2.4e-12 51.6% PF01391 1.5e-15 62.2% PF01391 4.5e-10 44.1% PF01391 2.7e-12 51.5% PF01391 3e-05 16.9% PF00014 3.5e-23 87.6% 1cqpA(2-181) 8e-32 26.09% 1cqpA(1-180) 6e-14 10.81% 1aalA(3-55) 1e-20 36.36% 1q38A(1-75) 3e-10 18.75% 1q38A(1-64) 2e-07 31.34% 1cfmA1(2-186) 2e-09 10.88% 1x5hA1(3-119) 1e-09 21.37% 2cuhA1(2-100) 1e-06 21.21% 1x5zA1(2-101) 1e-05 18.0% 1fnhA2(8-90) 2e-07 22.89% 1af0A1(19-222) 2e-07 15.64% c.62.1 1.1e-52 177.7% b.1.2 2.1e-20 69.1% b.1.2 7.5e-15 47.8% b.1.2 3e-14 47.6% b.1.2 7.6e-15 52.5% b.1.2 2.6e-14 47.8% b.1.2 1.8e-18 63.0% b.1.2 5.2e-15 51.9% b.1.2 7.3e-16 57.0% b.1.2 4.8e-14 47.0% c.62.1 2.6e-31 103.9% g.8.1 4.2e-16 51.2%

Sequence

MRLRLLVAALCAAEILMGAPEVWAQPRDRVTCTRLYAADIVFLLDGSSSIGRSNFREVRG
FLEGLVLPFSGAASAQGVRFATVQYSDDPQTEFGLDTLGSGSDTIRAIRELSYKGGNTRT
GAALHHVSDRVFLPRLTRPGVPKVCILITDGKSQDLVDTAAQKLKGQGVKLFAVGIKNAD
PEELKRVASQPTSDFFFFVNDFSILRTLLPLISRRVCTTAGGVPVTLPSDDTPSGPRDLV
LSEPSSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLPSERQEVNIPAGETSTRLQGLRP
LTDYQVTVVALYANSIGEAVSGTARTTAKEGLELSLQNITSHSLLVAWRRVPGANGYRVT
WRDLSGGPTQQQDLSPGQGSVFLDHLEPGTDYEVTVSALFGHSVGPAASLTARTASSVEQ
TLHPIILSPTSILLSWNLVPEARGYRLEWRRESGLETPQKVELPPDVTRHQLDGLQPGTE
YRLTLYTLLEGREVATPATVVPTGLEQLVSPVMNLQAIELPGQRVRVSWNPVPGATEYRF
TVRTTQGVERTLLLPGSQTTFDLDDVRAGLSYTVRVSARVGAQEGDASILTIHRDPEAPL
VVPGLRVVASDATRIRVAWGLVPGASGFRISWRTGSGPESSRTLTPDSTVTDILGLQPST
SYQVAVSALRGREEGPPVVIVARTDPLGPVRRVHLTQAGSSSVSITWTGVPGATGYRVSW
HSGHGPEKSLLVSGDATVAEIDGLEPDTEYIVRVRTHVAGVDGAPASVVVRTAPEPVGSV
SKLQILNASSDVLRVTWVGVPGATSYKLAWGRSEGGPMKHRILPGNKESAEIRDLEGGVS
YSVRVTALVGDREGAPVSIVITTPPATPALLETLQVVQSGEHSLRLRWEPVPGAPGFRLH
WQPEGGQEQSLTLGPESNSYNLVGLEPATKYQVWLTVLGQTGEGPPRKVTAYTEPSHIPS
TELRVVDTSIDSVTLTWTPVSGASSYILSWRPLRGTGQEVPRAPQTLPGTSSSHRVTGLE
PGISYVFSLTPIQSGVRGSEISVTQTPACSHGPVDVVFLLHATRDNAHNAEAVRRVLERL
VSALGPLGPQAAQVGLLTYSHRPSPLFPLNSSHDLGIILRKIRDIPYVDPSGNNLGTAVT
TAHRYLLASNAPGRRQQVPGVMVLLVDEPLRGDILSPIREAQTSGLKVMALSLVGADPEQ
LRRLAPGTDPIQNFFAVDNGPGLDRAVSDLAVALCQAAVTIEPQTGPCAVHCPKGQKGEP
GVTGLQGQAGPPGPPGLPGRTGAPGPQGPPGSTQAKGERGFPGPEGPPGSPGLPGVPGSP
GIKGSTGRPGPRGEQGERGPQGPKGEPGEPGQITGGGGPGFPGKKGDPGPSGPPGSRGPV
GDPGPRGPPGLPGISVKGDKGDRGERGPPGPGIGASEQGDPGLPGLPGSPGPQGPAGRPG
EKGEKGDCEDGGPGLPGQPGPPGEPGLRGAPGMTGPKGDRGLTGTPGEPGVKGERGHPGP
VGPQGLPGAAGHPGVEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGGAGAKGEKGEAGLPG
PRGASGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGS
PGPVGPRGRDGEAGEKGDEGIPGEPGLPGKAGERGLRGAPGPRGPVGEKGDQGDPGEDGR
NGSPGSSGPKGDRGEPGPPGPPGRLVDAGIESRDKGEPGQEGPRGPKGDPGPPGVSGERG
IDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGLDGKPGAPGPPGLHGASGKAGDPG
RDGLPGLRGEHGPPGPPGPPGVPGKAGDDGKPGLNGKNGDPGDPGEDGRKGEKGDSGAPG
REGPDGPKGERGAPGNPGLQGPPGLPGQVGPPGQGFPGVPGITGPKGDRGETGSKGEQGL
PGERGLRGEPGSLPNAERLLETAGIKVSALREIVDTWDESSGSFLPVPERRPGPKGDPGD
RGPPGKEGLIGFPGERGLKGERGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIPGLPG
RAGGSGEAGRPGERGERGEKGERGDQGRDGLPGLPGPPGPPGPKVAIEEPGPGLAREQGP
PGLKGAKGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGVAGPEGKPGL
QGPRGTPGPVGSHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPVGAVGLP
GPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGSSGKDGDRGSPGVPGSPGLPGPVGPK
GEPGPVGAPGQVVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGEAGRAGG
PGDPGEDGQKGAPGLKGLKGEPGIGVQGPPGPSGPPGMKGDLGPPGAPGAPGVVGFPGQT
GPRGETGQPGPVGERGLAGPPGREGAPGPLGPPGPPGSAGAPGASGLKGDKGDPGAGLPG
PRGERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKGAAGAAGLKGDKGDSAVIEGPP
GPRGAKGDMGERGPRGIDGDKGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGPKGEP
GAAGIPGEPGAPGKDGIPGFRGDKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKGEAGFP
GRPGLAGKKGDMGEPGLPGQSGAPGKEGLIGPKGDRGFDGQSGPKGDQGEKGERGPPGVG
GFPGPRGNDGSSGPPGPPGGVGPKGPEGLQGQKGERGPPGESVVGAPGAPGTPGERGEQG
RPGPAGPRGEKGEAALTEDDIRDFVRQEMSQHCACQGQFIASGSRPLPGYAADTAGSQLH
HVPVLRVSHVEEEGQVPPEDDDDFSEYSVYSVEDYQEPEVPWDGEAEIKGWDQRGSDLCS
LPLDEGSCTAYTLRWYHRAVPGGTACHPFVYGGCGGNANRFGTREACERRCPPQGVHSQK
TGAA

Region:1-2944
Length:2944aa
Label:Full sequence
Reset:click