Input sequence

Protein name Protocadherin-3
Organism Rattus norvegicus Length 797
Disorder content 8.4% ProS content 6.3%
IDEAL NA UniProt Q63418

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 797 1-26 27-675 676-686 687-712 713-723 724-778 779-797 27-675 687-712 724-778 1-26 676-686 713-723 779-797 5-26 684-686 713-723 784-797 26-133 193-661 127-240 140-661 36-235 29-112 249-337 456-551 575-662 138-233 29-112 138-233 247-337 351-441 455-551 567-662 200-599 34-312 581-663 21-126 127-234 230-379 340-442 438-600 554-663 363-376 489-502 691-712 779-788 690-712 1wyjA(8-115) 9e-34 61.11% 3q2wA(59-540) 1e-24 25.65% 2ystA(8-119) 8e-06 32.77% 3q2wA(7-540) 6e-84 24.51% 2wcpA(21-207) 1e-23 23.04% PF08266(1-84) 3e-22 52.38% PF00028(3-92) 6e-10 48.35% PF00028(2-92) 3e-08 40.62% PF00028(5-92) 1e-07 32.95% PF00028(1-92) 1e-05 33.33% PF08266 1.3e-51 182.1% PF00028 9.2e-08 36.4% PF00028 4e-21 80.8% PF00028 3.9e-13 54.2% PF00028 5.9e-19 73.6% PF00028 1.7e-06 32.2% 1dnvA(16-391) 4e-60 7.33% 2nlzA1(266-530) 3e-28 9.28% 1edhA1(12-98) 2e-10 11.49% b.1.6 2e-07 28.4% b.1.6 4.8e-26 90.9% b.1.6 4.6e-35 121.0% b.1.6 2.6e-24 85.0% b.1.6 4.7e-34 117.6% b.1.6 1.2e-19 69.0%

Sequence

METALAKIPQQRQVFFLTILSLLWKSSSEAIRYSMPEETESGYMVANLAKDLGIRVGELS
SRGAQIHYKGNKELLQLDAETGNLFLKEKLDRELLCGETEPCVLNFQIILENPMQFFQTE
LQLTDINDHSPEFPNKKMLLTIPESAHPGTVFPLKAARDSDIGSNAVQNYTVNPNLHFHV
VTHSRTDGRKYPELVLDRALDREEQPELTLILTALDGGAPSRSGTTTVHIEVVDINDNSP
QFVQSLYKVQVPENNPLNAFVVTVSATDLDAGVYGNVTYSLFQGYGVFQPFVIDEITGEI
HLSKELDFEEISNHNIEIAATDGGGLSGKCTVAVQVLDVNDNAPELTIRKLTVLVPENSA
ETVVAVFSVSDSDSGDNGRMVCSIPNNIPFLLKPTFENYYTLVTEGPLDRENRAEYNITI
TVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDSG
SNAHITYSLLPPDDPQLALDSLISINVDNGQLFALRALDYEALQSFEFYVGATDGGSPAL
SSQTLVRMVVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLITKVVAVDRDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAQKHKLLLLVKDNGDPLRSANVTLHVL
VVDGFSQPYLPLAEVAQDSMQDNYDVLTLYLVIALASVSSLFLLSVVLFVGVRLCRRARE
ASLGDYSVPEGHFPSHLVDVSGAGTLSQSYQYEVCLNGGTRTNEFNFLKPLFPILPTQAA
AAEERENAVVHNSVGFY

Region:1-797
Length:797aa
Label:Full sequence
Reset:click