Input sequence

Protein name Sodium channel protein type 10 subunit alpha
Organism Rattus norvegicus Length 1956
Disorder content 25.3% ProS content 18.5%
IDEAL NA UniProt Q62968

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1956 1-11 12-21 22-52 53-437 438-601 602-896 897-905 906-918 919-926 927-931 932-1112 1113-1822 1823-1836 1837-1880 1881-1956 12-21 53-437 602-896 906-918 927-931 1113-1822 1837-1880 1-11 22-52 438-601 897-905 919-926 932-1112 1823-1836 1881-1956 1-11 22-33 39-52 438-457 468-492 497-547 559-575 585-601 919-926 932-938 948-1014 1037-1042 1076-1100 1108-1112 1823-1836 1881-1907 1915-1935 1942-1956 1727-1872 1432-1452 1727-1872 1432-1452 156-175 156-395 1191-1418 700-858 1516-1675 1078-1163 155-395 698-888 903-1163 1189-1418 1511-1722 1472-1558 659-764 1149-1235 169-268 1525-1604 114-404 664-892 1111-1427 1464-1750 29-42 791-803 870-894 922-933 1002-1015 1103-1114 1249-1264 1399-1409 1574-1591 1700-1713 400-437 126-145 157-179 189-206 219-241 246-268 374-396 696-718 782-804 867-889 1153-1172 1192-1211 1218-1240 1282-1304 1354-1376 1396-1418 1473-1495 1510-1532 1539-1561 1611-1633 1698-1720 4dckA(1-146) 2e-58 76.03% 1byyA(1-21) 8e-05 100.0% 4dckA(1-146) 7e-46 76.03% 1byyA(1-21) 5e-06 100.0% 1qg9A(2-21) 0.0001 85.0% PF00520(2-198) 1e-28 31.71% PF00520(3-198) 8e-27 39.47% PF00520(3-169) 9e-15 35.93% PF00520(6-171) 1e-13 38.01% PF06512(134-219) 9e-13 45.35% PF00520 1.1e-71 248.7% PF00520 6.2e-54 189.8% PF06512 2.9e-121 413.4% PF00520 5.4e-71 246.4% PF00520 7.1e-57 199.5% 1orsC(1-88) 2e-16 10.23% 1orsC(1-104) 4e-14 14.02% 1orsC(2-86) 1e-09 12.64% 2e9xC1(1-102) 6e-12 12.5% 2e9xC1(1-82) 7e-05 15.85% f.14.1 4.8e-29 100.9% f.14.1 1.2e-25 89.1% f.14.1 2.2e-38 133.3% f.14.1 3.3e-35 122.3%

Sequence

MELPFASVGTTNFRRFTPESLAEIEKQIAAHRAAKKARTKHRGQEDKGEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKSRTISRFSATWALWLFSPFNLIR
RTAIKVSVHSWFSIFITITILVNCVCMTRTDLPEKVEYVFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCIRNGTDPHKADNLSSEMAEYIFIK
PGTTDPLLCGNGSDAGHCPGGYVCLKTPDNPDFNYTSFDSFAWAFLSLFRLMTQDSWERL
YQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQSQATIAEIEAKEKKFQEA
LEVLQKEQEVLAALGIDTTSLQSHSGSPLASKNANERRPRVKSRVSEGSTDDNRSPQSDP
YNQRRMSFLGLSSGRRRASHGSVFHFRAPSQDISFPDGITDDGVFHGDQESRRGSILLGR
GAGQTGPLPRSPLPQSPNPGRRHGEEGQLGVPTGELTAGAPEGPALDTTGQKSFLSAGYL
NEPFRAQRAMSVVSIMTSVIEELEESKLKCPPCLISFAQKYLIWECCPKWRKFKMALFEL
VTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIVFTVFFTMEMAFKIIAFDP
YYYFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIG
NSVGALGNLTFILAIIVFIFALVGKQLLSEDYGCRKDGVSVWNGEKLRWHMCDFFHSFLV
VFRILCGEWIENMWVCMEVSQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAP
EDDGEVNNLQLALARIQVLGHRASRAIASYISSHCRFRWPKVETQLGMKPPLTSSEAKNH
IATDAVSAAVGNLTKPALSSPKENHGDFITDPNVWVSVPIAEGESDLDELEEDMEQASQS
SWQEEDPKGQQEQLPQVQKCENHQAARSPASMMSSEDLAPYLGESWKRKDSPQVPAEGVD
DTSSSEGSTVDCPDPEEILRKIPELADDLDEPDDCFTEGCTRRCPCCNVNTSKSPWATGW
QVRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVF
EMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLR
ALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSKCVDTRNNPFS
NVNSTMVNNKSECHNQNSTGHFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDS
GEINSQPNWENNLYMYLYFVVFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICLNMITMMVETDE
QGEEKTKVLGRINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVILSIGSLLFSAI
LKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYSIFGMASFANVVDEAGIDDMFNFKTFGNSMLCLFQITTSAGWDGLLSPILNTGPPYCD
PNLPNSNGSRGNCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSED
DFDMFYETWEKFDPEATQFIAFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKIH
CLDILFAFTKNVLGESGELDSLKTNMEEKFMATNLSKASYEPIATTLRWKQEDLSATVIQ
KAYRSYMLHRSLTLSNTLHVPRAEEDGVSLPGEGYVTFMANSGLPDKSETASATSFPPSY
DSVTRGLSDRANINPSSSMQNEDEVAAKEGNSPGPQ

Region:1-1956
Length:1956aa
Label:Full sequence
Reset:click