Input sequence

Protein name cGMP-gated cation channel alpha-1
Organism Rattus norvegicus Length 683
Disorder content 29.4% ProS content 18.7%
IDEAL NA UniProt Q62927

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 683 1-119 120-601 602-683 120-601 1-119 602-683 1-44 72-98 105-117 616-659 395-588 614-667 271-524 486-592 614-667 489-578 193-387 488-581 395-596 265-392 150-396 395-594 39-56 93-145 348-353 668-681 120-147 291-313 366-388 4d7sA(1-188) 5e-33 29.9% 3swfA(2-55) 9e-22 96.3% 16vpA(53-307) 4e-34 7.06% 4chvA(245-343) 4e-25 25.0% 3swfA(2-55) 4e-19 96.3% PF00027(2-88) 3e-07 34.41% PF00520 2.8e-28 104.5% PF00027 5.9e-21 80.2% 1q3eA(1-192) 7e-32 30.2% 1p7bA2(5-115) 4e-13 10.08% f.14.1 4.5e-38 132.3% b.82.3 5.6e-45 156.6%

Sequence

MKTNIINTWHSFVNIPNVVVPAIEKEIRRMENGACSSFSDNDNGSLSEESENEDSLFRSN
SYRRRGPSQREHYLPGTMALFNVNNSSNKDQDPKEKKKKKKEKKSKADDKKESKKDPEKK
KKKEKEKEKKKEEKPKEKKEEEKKEVVVIDPSGNMYYNWLFCITLPVMYNWTMIIARACF
DELQSDYLEYWLIFDYVSDVVYLADMFVRTRTGYLEQGLLVKDELKLIEKYKANLQFKLD
VLSVIPTDLLYFKFGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIVI
IIHWNACVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPP
VLDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKD
MEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLV
ELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISI
LNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGLL
DINIANLGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKPL
IETEFSALEEPGGESEPTESLQG

Region:1-683
Length:683aa
Label:Full sequence
Reset:click