Input sequence

Protein name Limbic system-associated membrane protein
Organism Rattus norvegicus Length 338
Disorder content 8.3% ProS content 8.0%
IDEAL NA UniProt Q62813

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 338 1-24 25-311 312-312 313-335 336-338 25-311 313-335 1-24 312-312 336-338 1-24 336-338 46-297 40-302 232-305 32-128 132-215 218-307 88-302 40-132 37-132 124-218 211-306 12-28 171-186 324-336 313-335 2wimA(17-266) 3e-16 24.23% 2rikA(13-276) 3e-48 22.71% PF07679(14-87) 2e-08 39.19% PF07679 0.0003 6.8% PF07679 2.1e-11 48.5% PF07679 4.9e-13 53.9% 2cb2A1(80-299) 2e-16 9.01% 1olzA1(6-88) 2e-08 22.58% b.1.1 9.4e-15 48.0% b.1.1 4e-21 62.1% b.1.1 4.2e-23 67.3%

Sequence

MVGRVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNS
KVAWLNRSGIIFAGHDKWSLDPRVELEKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEPK
TSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPLGREFEGEEE
YLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRQASLKCE
ASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKLGVTN
ASLVLFRPGSVRGINGSISLAVPLWLLAASLFCLLSKC

Region:1-338
Length:338aa
Label:Full sequence
Reset:click