Input sequence

Protein name Synaptonemal complex protein 1
Organism Mus musculus Length 993
Disorder content 36.1% ProS content 30.9%
IDEAL NA UniProt Q62209

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam SEG:LCR COILS:coiledCoil 0 993 1-4 5-28 29-116 117-172 173-200 201-369 370-384 385-481 482-488 489-695 696-756 757-815 816-959 960-982 983-993 5-28 117-172 201-369 385-481 489-695 757-815 960-982 1-4 29-116 173-200 370-384 482-488 696-756 816-959 983-993 29-116 173-200 370-384 482-488 696-756 816-831 863-889 895-922 930-945 950-959 983-993 563-778 99-313 85-354 90-627 545-780 28-809 380-396 423-437 446-469 497-514 781-800 117-172 201-369 385-481 489-695 757-815 1c1gA(33-260) 4e-07 20.09% 4tqlA(15-225) 1e-06 22.87% 4rh7A(1631-1918) 0.0001 11.38% PF05483(4-522) 3e-85 74.35% PF05483(356-584) 2e-34 61.44% PF05483 0.0 1915.6%

Sequence

MEKQKPFTLFVPPRLSSSQVSAVKPQTAGGDSNYFKTANKCTEGDFGVPFTMSSRENIDK
DPAFQKLSILPMLEQVANSGSCHYQEGVNDSDFENSEPMSRLYSKLYKEAEKIKKWKVSI
ESELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATIHWC
NLLKETCARSAEKTNKYEYEREETRQVYVDLNSNIEKMILAFEELRVQAENARLEMHFKL
KEDHEKIQHLEEEYQKEVNNKENQVSELLIQSAEKENKMKDLTFLLEESRDKANQLEEKT
KLQDENLKELSEKKDHLTSELEDIKMSMQRSMSTQKALEEDLQIATKTISQLTEVKEAQM
EELNKAKTTHSFVVTELKATTCTLEELLRTEQQRLEKNEDQLKLITVELQKKSNELEEMT
KFKNNKEVELEELKNILAEDQKLLDEKKQVEKLAEELQEKEQELTFLLETREKEVHDLQE
QVTVTKTSEQHYLKQVEEMKTELEKEKLKNTELTASCDMLLLENKKFVQEASDMALELKK
HQEDIINCKKQEERLLKQIENLEEKEMHLRDELESVRKEFIQQGDEVKCKLDKSEENARS
IECEVLKKEKQMKILESKCNNLKKQVENKSKNIEELHQENKTLKKKSSAEIKQLNAYEIK
VSKLELELESTKQRFEEMTNNYQKEIENKKISEGKLLGEVEKAKATVDEAVKLQKEIDLR
CQHKIAEMVALMEKHKHQYDKIVEERDSELGLYKNREQEQSSAKIALETELSNIRNELVS
LKKQLEIEKEEKEKLKMAKENTAILKDKKDKKIQASLLESPEATSWKFDSKTTPSQNISR
LSSSMDSGKSKDNRDNLRASAKSILPTTVTKEYTVKTPTKKSIYQRENKYIPTGGSNKKR
KTAFEFDVNSDSSETADLLSLVSEEDVSNRLYDNNPPDSHLLVKTPKQTPLSLSTPASFM
KFGSLKKMREDRWTTIAKIDRKRRLKEAEKLFS

Region:1-993
Length:993aa
Label:Full sequence
Reset:click