Input sequence

Protein name Short transient receptor potential channel 1
Organism Mus musculus Length 793
Disorder content 12.0% ProS content 9.5%
IDEAL NA UniProt Q61056

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 793 1-39 40-692 693-738 739-783 784-793 40-692 739-783 1-39 693-738 784-793 1-7 28-39 693-738 784-793 51-218 193-255 193-255 457-645 220-318 53-132 15-185 15-28 398-409 621-643 747-774 351-372 387-409 508-530 540-559 584-606 621-643 4rlyA(27-214) 1e-07 18.23% PF08344(1-63) 2e-15 57.14% PF08344 3.2e-37 134.2% PF00520 3.1e-15 61.2% 2ccqA1(2-99) 9e-14 16.83% 1wdyA(188-275) 5e-06 18.18% d.211.1 1.8e-15 48.7%

Sequence

MMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDY
YMVKKILEENSSGDLNINCVDVLGRNAVTITIENESLDILQLLLDYGCQSADALLVAIDS
EVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLK
QDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFEL
SADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGL
LEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIF
WPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPAL
ERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKF
HDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKF
LGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFS
LAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEW
KFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEW
RNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLG
FRTSKYAMFYPRN

Region:1-793
Length:793aa
Label:Full sequence
Reset:click