Input sequence

Protein name Collagen alpha-1(XII) chain
Organism Mus musculus Length 3120
Disorder content 24.6% ProS content 17.2%
IDEAL NA UniProt Q60847

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 3120 1-27 28-105 106-136 137-230 231-237 238-320 321-344 345-411 412-436 437-515 516-538 539-618 619-639 640-715 716-722 723-726 727-807 808-813 814-898 899-914 915-989 990-999 1000-1033 1034-1038 1039-1076 1077-1091 1092-1170 1171-1192 1193-1291 1292-1297 1298-1375 1376-1390 1391-1740 1741-1755 1756-1758 1759-2157 2158-2162 2163-2246 2247-2251 2252-2281 2282-2286 2287-2311 2312-2391 2392-2405 2406-2416 2417-2423 2424-2504 2505-2524 2525-2679 2680-3120 28-105 137-230 238-320 345-411 437-515 539-618 640-715 727-807 814-898 915-989 1000-1033 1039-1076 1092-1170 1193-1291 1298-1375 1391-1740 1759-2157 2163-2246 2252-2281 2312-2391 2406-2416 2424-2504 2525-2679 1-27 106-136 231-237 321-344 412-436 516-538 619-639 716-722 808-813 899-914 990-999 1077-1091 1171-1192 1376-1390 1741-1755 2247-2251 2287-2311 2392-2405 2505-2524 2680-3120 1-18 106-112 131-136 336-344 433-436 521-528 536-538 635-639 716-722 808-813 899-904 910-914 990-995 1077-1085 1171-1176 1189-1192 1376-1378 1388-1390 1741-1746 2247-2251 2287-2295 2304-2311 2392-2405 2511-2524 2680-2695 2703-2727 2744-2899 2922-2937 2955-2991 2997-3095 3104-3120 1487-1847 631-896 1946-2284 827-1175 2510-2726 140-327 1197-1367 415-616 2315-2498 1850-2017 1384-1563 333-415 25-111 140-318 438-617 1196-1376 2322-2505 2510-2726 726-901 816-993 634-810 1657-1843 1385-1647 1940-2199 1757-2018 908-1175 2117-2284 1566-1743 336-422 19-111 140-288 440-604 2325-2474 1199-1347 724-801 25-103 140-312 334-416 440-612 632-710 723-805 813-895 904-987 995-1077 1087-1166 1199-1371 1385-1463 1474-1557 1566-1646 1655-1732 1754-1838 1846-1928 1935-2018 2026-2110 2118-2195 2206-2283 2325-2498 2749-2808 2826-2885 2933-2991 2992-3049 133-317 431-617 2324-2503 1196-1376 2522-2723 1487-1676 726-810 817-901 1656-1740 2135-2197 1012-1075 925-993 1384-1474 1756-1834 1940-2026 1091-1179 634-719 2030-2115 336-422 24-105 2089-2159 26-112 133-318 335-424 431-618 632-719 723-810 814-901 905-997 1002-1084 1087-1179 1192-1377 1386-1474 1469-1563 1565-1652 1656-1744 1754-1843 1845-1933 1941-2028 2026-2115 2118-2204 2211-2296 2319-2509 2507-2709 5-18 71-84 114-129 1909-1933 2292-2314 2749-2770 2776-2800 2819-2844 2853-2880 2943-2974 2991-3009 3011-3044 1fnfA(5-363) 5e-35 30.39% 1fnfA(94-359) 2e-31 32.96% 1fnfA(13-356) 2e-20 27.09% 3t1wA(16-365) 2e-26 28.17% 2uurA(3-210) 4e-25 31.8% 4igiA(3-190) 2e-22 34.03% 4igiA(1-171) 1e-21 36.78% 4nehA(112-314) 1e-19 33.81% 4nehA(122-310) 5e-17 27.6% 1qr4A(4-168) 7e-11 33.93% 2geeA(7-188) 2e-16 31.18% 3teuA(1-83) 8e-09 33.73% 3teuA(2-89) 3e-05 34.09% 1lfaA(4-181) 6e-53 26.11% 1lfaA(2-180) 5e-50 24.31% 1lfaA(1-180) 3e-47 19.78% 1lfaA(1-182) 2e-45 22.16% 2uurA(3-210) 3e-42 31.8% 1qr4A(3-175) 8e-28 30.68% 1qr4A(2-175) 8e-27 29.78% 1qr4A(2-175) 1e-25 27.68% 1qr4A(2-175) 1e-22 24.06% 1tdqA(4-267) 4e-27 21.51% 1tdqA(8-267) 3e-24 22.14% 1tdqA(6-266) 5e-22 21.51% 4gh7B(5-275) 2e-20 24.18% 4lxoA(1-172) 1e-14 29.07% 4lxoA(2-184) 1e-13 26.88% 3rzwA(3-89) 1e-10 21.84% 2ee3A(2-94) 2e-06 23.66% PF00092(1-148) 6e-15 34.64% PF00092(1-162) 1e-11 30.77% PF00092(1-148) 2e-11 33.33% PF00092(1-148) 3e-11 32.68% PF00041(1-82) 0.0009 39.02% PF00041 1e-18 72.8% PF00092 4.7e-71 246.6% PF00041 5.5e-18 70.4% PF00092 3.7e-66 230.4% PF00041 1.6e-18 72.1% PF00041 1.1e-20 79.3% PF00041 1.2e-17 69.2% PF00041 7.9e-10 43.3% PF00041 1.6e-12 52.2% PF00041 1.5e-09 42.3% PF00092 4.1e-72 250.2% PF00041 3.1e-19 74.5% PF00041 4e-16 64.2% PF00041 2.3e-16 65.0% PF00041 6e-17 66.9% PF00041 1.8e-22 85.2% PF00041 1.6e-14 58.8% PF00041 8.5e-15 59.8% PF00041 3.9e-16 64.2% PF00041 2.3e-18 71.6% PF00041 3.4e-08 37.8% PF00092 7e-63 219.5% PF01391 7.5e-06 28.0% PF01391 3.9e-13 54.2% PF01391 1.8e-05 20.9% PF01391 0.00019 2.2% 1ao3A(1-187) 4e-37 29.1% 1ao3A(1-187) 3e-34 18.32% 1ao3A(5-187) 7e-34 22.28% 1cqpA(1-180) 1e-33 19.78% 1z78A1(3-205) 1e-16 14.69% 1cfmA1(2-184) 7e-12 12.37% 1fnhA2(5-89) 3e-11 23.53% 1fnhA2(5-89) 3e-08 27.06% 1fnhA2(3-88) 1e-07 12.79% 1q38A(2-66) 3e-11 27.69% 1q38A(1-65) 1e-09 24.62% 1q38A(5-73) 1e-08 23.19% 1j8kA(1-93) 1e-10 25.81% 1j8kA(3-81) 5e-10 26.58% 1fnaA(1-88) 1e-10 28.41% 1fnaA(1-89) 2e-07 20.22% 1fnfA3(3-89) 5e-10 27.59% 1fnfA3(4-89) 4e-08 27.91% 1fnhA1(2-88) 7e-10 25.29% 1qg3A1(1-82) 6e-05 20.73% 1n98.1(3-85) 0.0001 9.64% b.1.2 1.5e-16 53.6% c.62.1 2.3e-63 210.3% b.1.2 1.3e-20 66.7% c.62.1 5.4e-58 192.5% b.1.2 2.7e-20 69.9% b.1.2 2e-21 73.8% b.1.2 2.8e-19 66.5% b.1.2 6.4e-20 68.7% b.1.2 3.1e-17 55.5% b.1.2 9.4e-19 64.7% c.62.1 9.2e-59 195.0% b.1.2 2.8e-20 65.6% b.1.2 1.1e-19 65.4% b.1.2 1.8e-20 70.6% b.1.2 2.7e-15 51.1% b.1.2 1e-22 78.2% b.1.2 1.9e-18 63.6% b.1.2 1.4e-20 66.4% b.1.2 1.5e-19 67.4% b.1.2 2.9e-20 69.8% b.1.2 1.1e-13 44.0% c.62.1 9.4e-57 185.4% b.29.1 1.9e-08 25.1%

Sequence

MQTRLPRALAALGVALLLSSIEAEVDPPSDLNFKIIDENTVHMSWERPVDPIVGYRITVD
PTTDGPTKEFTLAASTTETLLSDLIPETQYVVTITSYNEVEESVPVIGQLTIQTGGPTKP
GEKKPGKTEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFIVALVSAFDIGEEKTRVG
VVQYSSDTRTEFNLNQYYRREDLLAAVKKIPYKGGNTMTGDAIDYLVKNTFTESAGSRAG
FPKVAIIITDGKSQDEVEIPARELRNIGVEVFSLGIKAADAKELKQIASTPSLNHVFNVA
NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVIEPPSNLVVTELSSKYIRLSWDPSPSA
VTGYKILLTPMAAGSRHHALSVGPQTTTLNVRDLTADTEYQISVFAMKGLTSSEPTSVME
KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLAKSFEISPNRVQIS
LVQYSRDPHTEFTLKEFNRVEDIIKAINTFPYRGGSTNTGKAMTYVREKIFVPNKGSRSN
VPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPAETHVFTVE
DFDAFQRISFELTQSICLRIEQELAAIKKKAYVPPKDLRFTQVTANSFKAEWSPPGDNVF
SYHVTYKDANGDDEVTVVEPASSTSVVLNNLRPETLYLVNVTAEYEDGFSVPITGEETTA
EVKGVPRNLKVTDETTDSFKLTWSQAPGRVLRYRIRYRPVSGGESKEVSTPANQRRKTLE
NLTPDTKYEISVIAEYSSGPGSPLTGNAATEEVRGNPRDLRVSDATTSTLKLSWSRAPGK
VKQYLVTYTPAAGGETQEVTVRGDTTTTMLRKLKEGTQYDLSVTALYASGAGEALSGKGS
TLEERGSPQNLVTKDITDTSIGAYWTSAPGMVRGYRVSWKSLYDDIEAGETTLPGDAIHT
MIENLQPETKYKISVFATYSSGEGEPVTGDATTELSQDSKILRVDEETEHTMRVTWKAAP
GKVVNYRVVYRPQGGGRQMVAKVPPTVTSTVLKRLQPQTTYDITVLPMYKTGEGKLRQGS
GTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVLGPYDN
TVVLEELRAGTTYRVNVFGMFDGGESLPLVGQEMTTLSDTTVTPFLSSGMDCLTRAEADI
VLLVDGSWSIGRANFRTVRSFISRIVEVFEIGPKRVQIALAQYSGDPRTEWQLNAHRDKK
SLLQAVANLPYKGGNTLTGMALNFIRQQSFKTQAGMRPRARKIGVLITDGKSQDDVEAPS
KKLKDEGVELFAIGIKNADEVELKMIATDPDDTHAYNVADFESLSKIVDDLTINLCNSVK
GPGDLEAPTNLVISERTHRSFRVSWTPPSDSVDRYKVEYYPVSGGKRQEFYVSRLDTSTV
LKDLKPETDYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSLNIYDVGPTTMHVQWQPVGGA
TGYTVSYQPTRSPEGTKPKEMRVGPTVNDVQLTGLLPNTEYEVTVQAVLYDLTSEPAKAR
EVTLPLPRPQDVKLRDVTHSTMNVVWEPVLGKVRKYIVRYKTPDEEFKEVEVDRSRASTI
LKDLSSQTQYTVSVSAVYDEGTSPPATAYDTTRRVPAPTNLQFTEVTPESFRGTWDHGAS
DVSLYRITWAPVGNPDKMETILNGDENTLVFENLNPNTPYEVSITAIYPDESESEDLSGT
ERTLRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITYQPSTGEGNEQT
ITVGGRQNSVLLQKLKPDTPYTITVYSQYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTS
SLSVRWDHAEGNPRQYKLFYAPTSGGPEELVPIPGNTNYAILRNLQPDTPYTITVVPVYT
EGDGGRTSDTGRTLVRGLARNIQVYNPTPNSLDVRWDPAPGPVQQYRIVYSPVAGTRPSE
SIVVPGNTRTVHLERLIPDTPYSVNIVALYSDGEGNPSPSQGRTLPRSGPRNIRVFGETT
NSLSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVILQPLQPDTPYKITVIAI
YEDGDGGHLTGNGRTVGLLPPQNIHIFDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSNEP
MEAFVGEVTSYTLHNLNPSTTYDVSVYAQYDSGLSVPLTDQGTTLYLNVTDLKTYQVGWD
TFCVKWSPHRAATSYRLKLSPADGTRGQEITVRGSETSHCFTGLSPEAEYGVTVFVQTPN
LEGPGVPIKEQTTVKPTEAPTEPPTPSPPPTIPPARDVCKGAKADIVFLTDASWSIGDDN
FNKVVKFIFNTVGAFDEVNPAGIQVSFVQYSDEVKSEFKLNTYNDKALALGALQNIRYRG
GNTRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAAFVIQQSGFSVFVV
GVADVDYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSSCPLIYLDGYTS
PGFKMLEAYNLTEKNFASVQGVSLESGSFPSYSAYRLQKNAFINQPTAELHPNGLPPSYT
IILLFRLLPETPSDPFAIWQITDRDYRPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTD
EVKTLFYGSFHKVHIVVTSKSVKIYIDCYEIIEKDIKEAGNITTDGYEILGKLLKGERKS
ATFQIQSFDIVCSPVWTSRDRCCDIPSRRDEAKCPALPNACTCTQDSVGPPGPPGPAGGP
GAKGPRGERGINGAVGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQGMKGDAGEPG
LPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPGSPGVTGPSGKPGKPG
DHGRPGQSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMSRFNQMLNQIPNDYHSSR
NQPGPPGPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGTGSQGPRG
PPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDSSQCASIPYNGQG
YPEPYVPEGGAYLPEREPFIVPVEPERTAEYEDDYGADEPDQQHPDHMRWRRALRPGPAE

Region:1-3120
Length:3120aa
Label:Full sequence
Reset:click