Input sequence

Protein name Paired amphipathic helix protein Sin3a
Organism Mus musculus Length 1274
Disorder content 33.9% ProS content 9.8%
IDEAL IID50089 UniProt Q60520

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1274 1-119 120-199 200-300 301-333 334-461 462-837 838-875 876-924 925-928 929-1115 1116-1153 1154-1270 1271-1274 120-199 301-333 462-837 876-924 929-1115 1154-1270 1-119 200-300 334-461 838-875 925-928 1116-1153 1271-1274 1-8 200-203 334-348 356-382 838-875 925-928 1116-1140 1150-1153 295-383 454-528 120-189 295-383 454-528 120-189 552-651 141-187 322-381 141-187 322-381 478-524 551-651 299-384 120-191 114-189 295-383 455-528 98-119 217-248 267-282 834-847 915-930 1135-1151 897-924 1g1eB(1-89) 3e-46 100.0% 2ld7B(1-75) 3e-36 97.33% 2rmrA(2-71) 2e-34 100.0% 1g1eB(1-89) 2e-33 100.0% 2ld7B(1-75) 6e-30 97.33% 2rmrA(2-71) 6e-25 100.0% PF08295(2-101) 2e-32 64.0% PF02671(1-47) 2e-09 55.32% PF02671(1-47) 7e-07 43.33% PF02671 4.1e-19 74.1% PF02671 1.2e-12 52.7% PF02671 1.8e-12 52.0% PF08295 3.6e-57 200.5% 1e91A(2-84) 1e-14 59.3% 1e91A(4-85) 3e-14 28.05% a.59.1 3.1e-24 88.1% a.59.1 2.7e-25 91.9% a.59.1 1.1e-15 57.7%

Sequence

MKRRLDDQESPVYAAQQRRIPGSTEAFSHQHRVLAPAPPVYEAVSETMQSATGIQYSVAP
NYQVSAVPQSSGSHGPAIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSSQSAPTPAQ
PAPQPTAAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLMSLKESSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLESFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAPKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEVCVQ
VTDLYLAENNNGATGGQLNSQTSRSLLESAYQRKAEQLMSDENCFKLMFIQSQGQVQLTV
ELLDTEEENSDDPVEAERWSDYVERYMSSDTTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENVESLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKAP

Region:1-1274
Length:1274aa
Label:Full sequence
Reset:click