Input sequence

Protein name Semaphorin-5B
Organism Mus musculus Length 1093
Disorder content 8.4% ProS content 7.5%
IDEAL NA UniProt Q60519

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1093 1-35 36-364 365-376 377-562 563-575 576-773 774-789 790-934 935-937 938-945 946-1085 1086-1093 36-364 377-562 576-773 790-934 946-1085 1-35 365-376 563-575 774-789 938-945 1086-1093 6-30 365-376 563-575 774-789 938-945 1086-1093 80-534 795-906 605-712 550-657 721-849 667-766 48-501 548-708 798-845 855-907 71-472 612-656 801-849 670-712 858-906 68-479 497-544 610-661 668-712 799-849 856-906 911-951 46-495 795-846 605-658 550-606 849-897 660-699 42-496 497-551 550-603 605-658 660-712 791-849 851-904 906-954 7-38 977-999 3afcA(42-518) 7e-80 35.61% 1lslA(2-113) 6e-28 44.64% 1lslA(1-113) 3e-22 39.47% 1lslA(1-110) 6e-21 40.71% 1lslA(8-113) 1e-15 36.43% 1lslA(5-108) 1e-11 38.68% 1q47A(9-484) 3e-69 32.03% 1vmoA(11-163) 2e-09 20.5% 4v2aA(203-247) 1e-07 39.58% 1vexA(7-56) 3e-06 32.08% PF01403(3-412) 4e-104 48.8% PF00090(3-46) 1e-05 51.11% PF00090(3-50) 1e-05 51.02% PF00090(3-50) 0.0002 47.92% PF00090(3-50) 0.001 44.9% PF01403 3.2e-204 689.0% PF01437 4.5e-15 60.7% PF00090 9e-14 56.4% PF00090 1.3e-05 29.3% PF00090 7.9e-11 46.6% PF00090 2.7e-07 34.8% PF00090 0.00052 17.0% 1olzA2(5-473) 2e-122 32.85% 1lslA1(2-53) 3e-12 46.15% 1lslA1(1-54) 6e-12 38.89% 1lslA1(1-54) 0.0001 32.79% 1mknA(11-58) 3e-10 16.33% 1mknA(10-54) 2e-07 15.56% b.69.12 2.5e-152 475.6% g.16.2 1.6e-14 46.4% g.60.1 5.7e-08 24.6% g.60.1 3.2e-19 58.2% g.60.1 1.9e-15 47.8% g.60.1 3.4e-20 62.1% g.60.1 2.1e-17 52.7% g.60.1 1.5e-07 23.4%

Sequence

MVVPGPLALSLLLSSLTLLVSHLSSSQDIASESSSEQQMCTRREHPIVAFEDLKPWVFNF
TYPGVRDFSQLALDPSRNQLIVGARNYLFRLSLANVSLLQATEWASSEDTRRSCQSKGKT
EEECQNYVRVLIVSGRKVFMCGTNAFSPVCSSRQVGNLSRTIEKINGVARCPYDPRHNST
AVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAY
FFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNE
LQSAFHLPEQDLIYGVFTTNVNSIAASAVCAFNLSAISKAFNGPFRYQENPRAAWLPIAN
PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSVRFSHLVVDL
VQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLEELHVLPPGRLEPLRSLRILHSAR
ALFVGLSDRVLRVPLERCSAYHSQGACLGARDPYCGWDGKRQLCSTLEDSSNMSLWIQNI
TTCPVRNVTRDGGFGPWSPWKPCEHLDGDNSGSCLCRARSCDSPRPRCGGLECLGPSIHI
ANCSRNGAWTAWSSWAQCSTSCGIGFQVRQRSCSNPAPRHGGRICVGKSREERFCNENTP
CPVPIFWASWGSWSKCSNNCGGGVQSRRRSCENGNSCPGCGVEFKTCNPEACPEVRRNTP
WTPWLPVNVTQGGARQEQRFRFTCRAPLPDPHGLQFGKRRTETRTCPADGTGACDTDALV
EDLLRSGSTSPHTLNGGWATWGPWSSCSRDCELGFRVRKRTCTNPEPRNGGLPCVGDAAE
YQDCNPQACPVRGAWSCWTAWSQCSASCGGGHYQRTRSCTSPAPSPGEDICLGLHTEEAL
CSTQACPEGWSLWSEWGVCTEDGAQSRSRSCEELLPGPGACVGNSSQSRPCPYSEIPVIL
PASSVEETTSCGGFNLIHLIVTGVSCFLVSGLLTLAVYLSCQHCQRQSQESTLVHPATPN
HLHYKGGGTPKNEKYTPMEFKTLNKNNLIPDDRANFYPLQQTNVYTTTYYPSPLNKPSFR
PEASPGQRCFPNS

Region:1-1093
Length:1093aa
Label:Full sequence
Reset:click