Input sequence

Protein name ERAD-associated E3 ubiquitin-protein ligase HRD1
Organism Oryza sativa subsp.japonica Length 500
Disorder content 34.0% ProS content 11.8%
IDEAL NA UniProt Q5Z880

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 500 1-134 135-140 141-336 337-500 1-134 141-336 135-140 337-500 135-140 368-379 385-399 457-482 280-330 280-333 292-329 292-329 265-337 269-333 104-120 345-359 380-386 7-24 34-56 99-121 141-160 173-195 224-246 2lxhC(3-53) 5e-12 56.86% 2lxhC(3-56) 9e-18 53.7% PF00097(1-43) 7e-05 51.16% PF00097 1.4e-09 42.4% 1rmdA2(4-72) 1e-12 25.68% g.44.1 1.7e-17 58.7%

Sequence

MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL
VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA
QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM
ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQPVPGNGT
PGSERAAGENISRRQAKLEAAASAASLYGRSFAYPPANNLNRYSTPPQSTSNGPQSGEAS
TSNQSPKGHATADPSAPTFYARGAVSSVTTTRELESSLQKAYENAIKSQIEMLQIQLQMF
QHGATSSATNNENGEHTKSD

Region:1-500
Length:500aa
Label:Full sequence
Reset:click