Input sequence

Protein name Small subunit processome component 20 homolog
Organism Mus musculus Length 2788
Disorder content 9.8% ProS content 4.2%
IDEAL NA UniProt Q5XG71

Prediction

Order Disorder ProS RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 2788 1-14 15-660 661-669 670-776 777-786 787-869 870-909 910-1025 1026-1034 1035-1266 1267-1270 1271-1286 1287-1288 1289-1688 1689-1695 1696-1763 1764-1801 1802-1805 1806-1947 1948-1956 1957-2039 2040-2056 2057-2169 2170-2174 2175-2421 2422-2427 2428-2507 2508-2515 2516-2570 2571-2616 2617-2744 2745-2788 15-660 670-776 787-869 910-1025 1035-1266 1289-1688 1764-1801 1806-1947 1957-2039 2057-2169 2175-2421 2428-2507 2516-2570 2617-2744 1-14 777-786 870-909 1026-1034 1271-1286 1696-1763 1948-1956 2040-2056 2571-2616 2745-2788 10-14 777-786 901-909 1033-1034 1276-1286 1696-1707 1714-1718 1948-1956 2052-2056 2571-2576 2587-2590 2745-2772 2778-2788 922-1065 921-1065 1388-2374 29-1152 1438-2711 244-255 442-454 571-581 695-704 873-915 932-947 1351-1361 1584-1597 1704-1718 2502-2512 2588-2604 2726-2736 2745-2763 PF07539(2-143) 3e-27 43.75% PF07539 7.5e-89 305.8% 1u6gC(2-990) 4e-05 8.86% a.118.1 3.2e-05 16.2% a.118.1 2.5e-22 75.6%

Sequence

MKPKPLSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEDVETYFFEALLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIRNSLAYQPLLDLVVQLARDLQT
DFYPHFEDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSKIYSLYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLNEHPEKVEGVGQLLFEMCKGVRNMFH
SCTGQALKLLLQKLGPVTETETQLPWILVGETLKTMAKSSVVYIYKEHFGVFFDCLQESL
LELHNKVTEANCCENSEQMRRLLETYLIVVKHGSGSKITRPADVCGVLSEALQTASLSTS
CRKTLLDVVSALLLAENVSLPETLIKETVEKVFESKFERRSVLDFSEVMFAMKQFEQLFL
PSFLLYIENCFLMDNSVVSDEALAILAKLILHKAPPPTAGSMAIEKYPLVFSQQTVGSYL
KQRKADSKRRKEQFPVLSHLLSIVQLPPNKDATYLSRSWAALVVLPHLRPLEKEKTISLV
SCFIESLFLAVDRGSFGKGHLFVLCQAVNTLLSLEESSELLHLVPVGRVKHLVLTSPTEP
SVLLLADLYYQRLALCGCKGPLSEEALMELFPKLQANISTGVSKIRLLTIRILNHFDIRL
PVSMEDDGLSERQSAFAILRQAELVPATVSDYREKLLHLRKLRHDVVQGAVPQGRLQEVP
LRYLLGMLYVNFSALWDPVIELISSHAYGMENKQFWNVCYEHLEKAASHAEKELHKDVRD
EESTGDESWEQTQEGDVGDLYQQQLALKTDCRERLDHTNFRFLLWRALAKFPERVEPRSR
ELSPLFLRFINNEYYPADLQVAPTQDLRKKGRGAVAEEEEEEEPAAGEDEELEEEAVPTE
DAPQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQAVQKITLDC
IMTYRHPHILPYRENLQRLLDDRSFKEEIVHFNISEDNTVVKAAHRADLFPILMRILYGR
MKNKTGSKTQGKSASGTRMAIVLRFLAGTQPEEIQLFLDLLSEPVKHFKDGDCCSAVIQA
VEDLDVSKVLPVGRQHGVLNSLEVVLKNISHLISTYLPKILQILLCMTATVSHILDQREK
IQLRFINPLKNLRRLGIKMVTDIFLDWESYQFKAEEIDAVFHGTVWPQICRLGSESQYSP
TPLLKLISIWSRNARYFPLLAKQKPGHPEYDILTNVFAVLSAKNLSEATASIIMDIVDDL
LNLPDFQPTEAVPSLPVTGCVYADVAEDTEPVTVGGRLVLPHVPAILQYLSKTTISAEKV
KKKKNRAQVSKELGILSKISKFMKDREQCSLLITLLLPFLLRGNVAQDTELDILVTVQNL
LQHCLHPAHFLRPLAKLFSVIKNKLSRQLLCTVFQMSDFESRLKYITDIVKLNAFDKRHL
DDINFDVRFSAFQTITSNIKAMQTVDADYLIAVMHNCFYNMEIGDMSLSDNASICLTSII
KRLAALNVTEKEYKEIIHRTLLEKLRKGLKSQTESVQHDYTLILSCLIQTFPNQLEFKDL
VQLTHCHDPEMDFFENMKHIQIHRRARALKKLAKQLLEGQVVLSSKSLQNYIMPYAMAPI
LDEKMLKHENITIAATEVIGAICRHLSWPAYVYYLKHFIHVLQSGQINQKLAVSLLVIVL
EAFHFDYKTLEEQMGNVKNEENTVEMAELLEPEAMEVEDMDEAGKEQASERLSDSKEALG
APEAAASEGTVAKEQECISKSVSFLPRNKEELERTIQTIQGAITGDILPRLHKCLASATK
REEEHKLVKSKVVNDEEVVRVPLAFAMVKLMRSLPREVMEANLPSILLKVCVLLKNRAQE
IRDIARSTLSKIIEDLGVHFLQYVLKELQTTLVRGYQVHVLTFTVYTLLQGLSSKLQVGD
LDSCLHIMTEIFNHELFGALAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKQQVTKL
ILPLKEILQNTTSLKLARKVHETLRRIIAGLIVNPDMTADALLLLSYGLVSENLPLLTEK
EKKPAAPVPDARLPPQSCLLLPATPVRGGPKAVVNKKTNMHIFIESGLRLLHLSLKTSRI
KSSSEHVLEMLDPFVSVLINCLGAQDVKVITGALQCLIWVLRFPLPSIASKAEQLTKHLF
LLLKNYARVGAARGQNFHLVVNCFKCVTIVVKKVKSHQITEKQLQVLLAYAEEDIYDTSR
QATAFGLLKAILSRKLLVPEIDDIMRKVSKLAISAQNEPARVQCRQVFLKYILDYPLGEK
LRPNLEFMLAQLNYEHETGRESTLEMIAYLFETFPQGLLHEHCGMFFIPLCLMMVNDDSA
MCKRMASMAIKSLLSKVDREKKDWLFGLVTSWFEAKKRLNRQLAALACGLFVESEGVDFE
RRLGTLLPVIEKEIDPENFKDIIEETEEKAADRLLFGFLTLMRKLIKECSIIHFTKPSET
LSKIWSHVHSHLRHPHSWVWLTAAQIFGLLFASCQPEELIQKWKGKKTKKKTSDPIAVRF
LTSDLGQKMKSISLASCHQLHSKFLDESLGEQVVKNLLFIAKVLYLLELESGNKRGEVKD
SEEQDTLADALAREAAEEKAGAGGKMESNREKKEEPSKPATLMWLIQKLSRMAKLEAAYS
PRNPLKRTCIFKFLGAVAVDLGVDRVKPYLPLIIAPLFRELNSTFAEQDPVLKNLSQEII
ELLKKLVGLESFSLAFASVQKQASEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEAK
KRKIEFLRPGYKAKRQKSHSLRDLAMVE

Region:1-2788
Length:2788aa
Label:Full sequence
Reset:click