Input sequence

Protein name Probable protein transport Sec1b
Organism Oryza sativa subsp.japonica Length 659
Disorder content 15.0% ProS content 4.6%
IDEAL NA UniProt Q5VNU3

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 659 1-13 14-35 36-39 40-210 211-220 221-295 296-300 301-345 346-349 350-482 483-501 502-503 504-541 542-598 599-653 654-659 14-35 40-210 221-295 301-345 350-482 504-541 599-653 1-13 346-349 483-501 542-598 654-659 346-349 483-490 566-577 654-659 24-651 19-651 44-648 43-648 21-539 598-651 14-654 579-588 3c98A(9-549) 8e-65 27.99% 2xheA(5-564) 9e-88 21.93% PF00995(2-553) 4e-69 29.63% PF00995 1.2e-68 238.6% 1dn1A(6-493) 2e-99 29.43% 1dn1A(495-549) 5e-08 32.73% e.25.1 2.2e-149 483.2%

Sequence

MSMSGSDFGAPCDDPKIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYAC
KMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFF
SSPIPKELVSYIKNDSSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKK
FNDTISTMATRIATTFASLKEFPCVRYRAPKGTDPMTTPKFDMVPKWLATAVWDIVSKYK
STIPEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPE
RKEALLEDHDPLWVELRHIHIADASERLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKI
VQALPQYGEQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSK
QDMSPENKLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKAS
RPGGFSLKFDAQKKKNAARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSE
PSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRL
GNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKMLTAGGANDV

Region:1-659
Length:659aa
Label:Full sequence
Reset:click