Input sequence

Protein name Collagen alpha-1(XXVII) chain
Organism Mus musculus Length 1845
Disorder content 78.8% ProS content 63.6%
IDEAL NA UniProt Q5QNQ9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1845 1-37 38-41 42-45 46-54 55-67 68-244 245-1644 1645-1845 38-41 46-54 68-244 1645-1845 1-37 42-45 55-67 245-1644 1-37 42-45 62-67 252-276 286-291 343-349 403-411 450-455 461-469 561-566 576-583 594-1644 1664-1845 1469-1549 1664-1845 1467-1549 720-788 947-1012 45-237 1661-1844 610-669 679-738 742-801 817-876 877-936 937-996 997-1056 1057-1116 1117-1176 1177-1236 1240-1299 1303-1363 1364-1423 1424-1483 1484-1543 1544-1603 1661-1844 1642-1783 44-226 1477-1553 28-238 2-21 325-343 356-372 428-443 455-467 584-597 619-664 676-691 693-719 790-808 817-838 858-880 886-910 912-946 1015-1042 1069-1090 1111-1138 1150-1168 1224-1240 1255-1270 1299-1352 1360-1422 1438-1466 1556-1574 1586-1603 4ae2A(1-212) 7e-27 32.71% 2pneA(3-81) 8e-05 38.27% 4ae2A(1-212) 1e-33 31.92% 2pneA(1-81) 2e-06 37.35% 2pneA(11-80) 3e-05 37.14% 2pneA(4-70) 0.0001 35.82% 2uurA(12-206) 0.0008 18.05% PF01410(1-209) 4e-31 36.97% PF01391 1.4e-09 42.4% PF01391 2.5e-12 51.6% PF01391 9.3e-14 56.3% PF01391 1.1e-09 42.7% PF01391 1.8e-10 45.4% PF01391 1.4e-14 59.0% PF01391 1.2e-11 49.3% PF01391 6.6e-10 43.5% PF01391 1.6e-09 42.2% PF01391 1.2e-12 52.6% PF01391 5.2e-10 43.9% PF01391 1.7e-05 21.7% PF01391 4.5e-09 40.8% PF01391 6.6e-09 40.2% PF01391 3.6e-11 47.7% PF01391 1.6e-09 42.3% PF01410 5.1e-37 133.6% 1j83A(17-173) 9e-23 9.88% 1z78A1(4-197) 2e-12 11.0% 1af0A1(145-221) 2e-05 6.49% b.29.1 2.1e-16 50.7%

Sequence

MGTGFARGARGTAASGPGGGFLFAWILVSFTCHLASTQGAPEDVDVLQRLGLSWTKAGGG
RSPTPPGVIPFPSGFIFTQRAKLQAPTANVLPTTLGRELALVLSLCSHRVNHAFLFAIRS
RKHKLQLGLQFLPGRTIIHLGPRQSVAFDLDVHDGRWHHLALELRGRTVTMVTACGQHRV
PVPLPSRRDSMLDPQGSFLLGKVNPRAVQFEGALCQFSIHPVAQVAHNYCAHLRERCRQV
DTYSPQVGTLFPWDSGPAFALHPEPALLGLGNLTRTPATLGARPVSRALAVTLAPAMPTK
PLRTVHPDVSEHSSSQTPLSPAKQSARKTPSPSSSASLANSTRVYRPAAAQPRQITTTSP
TKRSPTKPSVSPLSVTPMKSPHATQKTGVPSFTKPVPPTQKPAPFTSYLAPSKASSPTVR
PVQKTFMTPRPPVPSPQPLRPTTGLSKKFTNPTVAKSKSKTTSWASKPVLARSSVPKTLQ
QTVLSQSPVSYLGSQTLAPALPPLGVGNPRTMPPTRDSALTPAGSKKFTGRETSKKTRQK
SSPRKPEPLSPGKSARDASPRDLTTKPSRPSTPALVLAPAYLLSSSPQPTSSSFPFFHLL
GPTPFPMLMGPPGSKGDCGLPGPPGLPGLPGSPGARGPRGPPGPYGNPGPPGPPGAKGQK
GDPGLSPGQAHDGAKGNMGLPGLSGNPGPLGRKGHKGHPGAAGHPGEQGQPGPEGSPGAK
GYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGEMGRPGFPGDF
GERGPPGLDGNPGEIGLPGPPGVLGLIGDTGALGPVGYPGPKGMKGLMGGVGEPGLKGDK
GEQGVPGVSGDPGFQGDKGSHGLPGLPGGRGKPGPLGKAGDKGSLGFPGPPGPEGFPGDI
GPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLD
GSKGEPGDPGRPGPVGEQGLMGFIGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTP
GGIGNPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQP
GQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAV
GEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDHGPVGPDGLKGDRGDPGPDGEH
GEKGQEGLKGEDGSPGPPGITGVPGREGKPGKQGEKGQRGAKGAKGHQGYLGEMGIPGEP
GPPGTPGPKGSRGTLGPTGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGDQGED
GKTEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGP
KGSKGEEGPKGKPGKAGPSGRRGTQGLQGLPGPRGVVGRQGPEGTAGSDGIPGRDGRPGY
QGDQGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGL
PGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGP
PGMLGPSGLPGPKGDRGSRGDLGLQGPRGPPGPRGRPGPPGPPWHPIQFQQDDLGAAFQT
WMDAQGAVRSEGYSYPDQLALDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDLMD
CEQRMADGTYWVDPNLGCSSDTIEVSCNFTQGGQTCLKPITASKAEFAVSRVQMNFLHLL
SSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFRPEVSMDGCKVHD
GRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL

Region:1-1845
Length:1845aa
Label:Full sequence
Reset:click