Input sequence

Protein name RNA-binding motif, single-stranded-interacting protein 1
Organism Rattus norvegicus Length 403
Disorder content 56.3% ProS content 27.8%
IDEAL NA UniProt Q5PQP1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 403 1-10 11-15 16-57 58-209 210-214 215-228 229-403 11-15 58-209 215-228 1-10 16-57 229-403 1-10 16-25 229-236 244-289 333-346 360-366 374-378 392-403 127-224 62-135 127-225 62-135 64-113 143-210 64-135 143-213 63-113 142-207 49-123 133-243 7-24 36-54 114-126 1x5oA(12-109) 5e-51 97.96% 1x4eA(6-79) 1e-25 90.54% 1x5oA(12-110) 6e-40 96.97% 1x4eA(6-79) 4e-20 90.54% PF00076(1-50) 5e-08 40.0% PF00076(1-69) 2e-07 34.78% PF00076 2.1e-15 61.8% PF00076 1.1e-11 49.5% 1cvjA1(2-52) 5e-14 33.33% 1cvjA1(2-68) 1e-11 26.87% d.58.7 2.5e-19 64.5% d.58.7 8.5e-17 61.7%

Sequence

MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLS
KTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV
SALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTS
RGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPN
GRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQS
PSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAMQ
GAYLPQYTHMQTATVPVEEASGQQQVTVETSNDHSPYTFPPNK

Region:1-403
Length:403aa
Label:Full sequence
Reset:click