Input sequence

Protein name E3 ubiquitin-protein ligase TRIM13
Organism Rattus norvegicus Length 407
Disorder content 14.0% ProS content 12.0%
IDEAL NA UniProt Q5M7V1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 407 1-87 88-94 95-218 219-244 245-247 248-271 272-407 1-87 95-218 245-247 272-407 88-94 219-244 248-271 89-94 219-244 248-264 1-75 94-143 1-75 88-139 10-57 89-131 4-103 92-140 1-107 92-131 265-277 316-336 172-199 316-338 2ct2A(9-80) 6e-07 32.91% 2djaA(21-70) 4e-05 34.0% 2ct2A(9-80) 8e-17 32.91% 2d8uA(5-56) 5e-08 26.92% PF00097 1.9e-08 38.7% PF00643 1.2e-13 56.0% 1jm7A(18-103) 5e-12 27.0% 2d8uA1(2-50) 6e-10 26.53% g.44.1 2.8e-19 64.7% g.43.1 3.5e-08 31.6%

Sequence

MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE
TSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCKEHLGQPLNIFCVTDMQLICGVCATR
GSHTKHVFSSIEDAYTQERDAFEFLFQSFETWRRGDALSRLDTLETNKRKSLQLLTKDSD
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQTYDPEINKLNSILQEQRMAFNIAEAFK
DVSEPIIFLQQMQEFREKIKVIKETPLPPSNLPTSPLMKNFDTSQWEDIKLVDVDKLSLP
QDTGVLTSRSPWHPCLLLMAVVLLGLLVFFGPTVFLEWSPLEELATWKDCLSSFNSYLTK
SADFVEQSVFYWEQMTDGLFVFSERVKNVSLVALNNVAEFVCKYKLL

Region:1-407
Length:407aa
Label:Full sequence
Reset:click