Input sequence

Protein name Pentatricopeptide repeat-containing protein At3g49170, chloroplastic
Organism Arabidopsis thaliana Length 850
Disorder content 0.4% ProS content 0.4%
IDEAL NA UniProt Q5G1T1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 850 1-3 4-850 4-850 1-3 1-3 319-583 61-378 539-708 32-637 660-818 98-131 132-166 235-269 440-474 541-575 513-741 101-329 273-484 682-832 32-138 443-547 32-436 437-707 405-414 763-779 4wslA(17-291) 1e-24 27.08% 4wslA(2-288) 4e-14 23.85% 4ozsA(1-173) 6e-12 28.25% 4m57A(75-662) 1e-51 17.48% 1aa7A(2-156) 3e-16 9.43% PF01535 2.1e-07 35.2% PF01535 1.2e-07 36.0% PF01535 7.4e-06 30.1% PF01535 0.00049 24.0% PF01535 1.8e-10 45.4% 2fsqA1(2-232) 3e-48 6.36% 2fsqA1(2-232) 3e-17 6.75% 2fsqA1(2-214) 2e-06 5.99% 1ug9A4(3-135) 2e-34 8.97% 1nnvA(4-105) 3e-10 10.19% 1nnvA(2-105) 3e-09 9.43% a.118.8 5.1e-18 61.2% a.118.8 2.1e-23 80.2%

Sequence

MAMISFSFPSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPM
DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF
ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD
FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM
ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL
VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF
SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK
SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL
LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV
ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS
MYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE
LGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVG
DKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLY
QHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFK
DGKCSCNDYW

Region:1-850
Length:850aa
Label:Full sequence
Reset:click