Input sequence

Protein name Pentatricopeptide repeat-containing protein At3g18110, chloroplastic
Organism Arabidopsis thaliana Length 1440
Disorder content 8.3% ProS content 5.9%
IDEAL NA UniProt Q5G1S8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1440 1-107 108-1428 1429-1440 108-1428 1-107 1429-1440 1-10 20-31 38-55 69-101 1429-1440 228-518 752-1009 944-1167 507-832 134-814 679-1007 895-1168 226-260 298-332 333-367 368-402 403-436 439-473 474-508 509-543 788-822 928-962 963-997 998-1032 1103-1137 301-514 791-1012 931-1142 627-808 229-339 477-571 171-267 168-396 366-667 890-1175 612-626 838-848 1013-1024 1199-1214 1417-1423 4wslA(6-293) 3e-52 37.11% 4wslA(3-260) 2e-25 28.29% 4wslA(20-243) 1e-16 26.79% 4wslA(2-293) 7e-11 22.39% 4m57A(12-663) 2e-77 21.72% 4wslA(1-293) 2e-37 23.4% 4wslA(6-279) 2e-26 25.55% PF01535 3.6e-09 41.1% PF01535 1.7e-09 42.2% PF01535 4.4e-09 40.8% PF01535 6.5e-08 36.9% PF01535 0.00012 26.0% PF01535 4.2e-08 37.5% PF01535 7.3e-09 40.1% PF01535 0.00068 23.5% PF01535 2e-08 38.6% PF01535 0.00062 23.7% PF01535 3.8e-06 31.0% PF01535 5.2e-08 37.2% PF01535 3.4e-05 27.9% 2fsqA1(2-210) 1e-30 5.99% 2fsqA1(2-219) 8e-23 8.0% 2fsqA1(2-209) 1e-17 6.51% 2fsqA1(50-227) 7e-08 4.84% 1nnvA(2-105) 8e-14 9.82% 1nnvA(2-95) 2e-09 10.42% 1nnvA(14-105) 0.0004 6.19% a.118.8 1.3e-12 39.3% a.118.8 3.2e-19 65.4% a.118.8 3.7e-15 47.7%

Sequence

MAVSAGALAFPALSVRATLNPEIKDEQANISSTTSSSQKFTYSRASPAVRWPHLNLREIY
DSTPSQTLSSPVSPIAGTPDSGDVVDSIASREEQKTKDETAVATRRRRVKKMNKVALIKA
KDWRERVKFLTDKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEW
LNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGK
FSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITY
NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL
KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL
ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI
CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT
PSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVA
ITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNL
SAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCK
SMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQ
SGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE
LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE
LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP
DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF
EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS
GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW
TCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIEDNA
ALNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALV
ALTLWLDHMQDASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRT
GLLVAKAHSLRMWLKDSPFCFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERL
GGFVSPKKFSRLALLPDEMRERVIKTDIEGHRQKLEKMKKKKMGNETNGINTRRKFVRSK

Region:1-1440
Length:1440aa
Label:Full sequence
Reset:click