Input sequence

Protein name Cadherin-20
Organism Rattus norvegicus Length 801
Disorder content 15.1% ProS content 8.9%
IDEAL NA UniProt Q5DWV1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 801 1-11 12-34 35-56 57-642 643-671 672-685 686-718 719-756 757-774 775-793 794-801 12-34 57-642 672-685 719-756 775-793 1-11 35-56 643-671 686-718 757-774 794-801 1-11 53-56 643-671 697-707 757-765 771-774 799-801 60-381 230-600 697-792 60-381 280-594 722-792 676-792 396-485 173-246 281-380 504-594 64-156 170-265 279-381 394-485 498-595 643-794 107-532 488-599 58-157 158-266 267-383 384-487 488-605 248-259 621-640 651-662 666-674 759-773 12-34 620-642 2a62A(1-319) 7e-111 63.35% 3q2wA(66-442) 4e-19 25.83% 3ifqC(2-88) 4e-08 34.38% 2a62A(1-319) 9e-107 63.35% 2a62A(6-318) 2e-44 26.73% 1i7xD(6-63) 5e-11 33.8% PF01049(35-139) 1e-13 46.15% PF00028(3-92) 4e-07 37.36% PF00028(4-75) 5e-07 47.37% PF00028(3-91) 9e-06 38.83% PF00028(7-91) 0.0005 34.07% PF00028 1.4e-09 42.4% PF00028 2.7e-24 91.3% PF00028 1.1e-14 59.4% PF00028 2.2e-20 78.3% PF00028 6e-13 53.6% PF01049 5.1e-81 279.7% 1dnvA(6-397) 3e-58 6.03% 1l3wA5(1-101) 3e-15 17.86% b.1.6 4.3e-14 48.9% b.1.6 1.5e-27 97.9% b.1.6 4.9e-25 92.5% b.1.6 1.6e-25 92.8% b.1.6 2.8e-23 74.5%

Sequence

MWTTGRMSNAKSWLGLGTSLYFWALMDLATTVLSSTPMPEVELDTLFSGKPQSHQRSRRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGIIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPVSSTVGRVFAKD
LDEGINAEMKYTIVDGDGADAFDINTDPNFQVGIITVKKPLSFESKKSYTLKVEGSNPHV
EMRFLNLGPFQDTTTVHIIVEDVDEPPVFEPRFYFVEVPEDVTIGTTIQIISAKDPDMTN
NSIRYSIDRGSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVAA
TIKVLDVNDNAPEFPRFYEAFICENAKAGQLIQTVSAVDQDDPHNGQHFYYSLAPEAANN
PNFTVRDNQDNTARILTRRSGFRQQEQSVFYLPILIADSGQPVLSSTGTLTIQVCSCSDD
GHVMSCSPEAYMLPVSLSRGALIAILACVFVLLVLVLLILSMRRHRKQPYIIDDDENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTRQDMLPEIESLSRYVPQTCAVSS
TVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQSFDFLTDW
GPRFRKLAELYGASEGPSPLW

Region:1-801
Length:801aa
Label:Full sequence
Reset:click