Input sequence

Protein name DNA-directed RNA polymerase V subunit 1
Organism Arabidopsis thaliana Length 1976
Disorder content 32.8% ProS content 13.1%
IDEAL NA UniProt Q5D869

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1976 1-8 9-132 133-149 150-281 282-288 289-312 313-731 732-735 736-1235 1236-1241 1242-1253 1254-1728 1729-1851 1852-1976 9-132 150-281 313-731 736-1235 1242-1253 1729-1851 1-8 133-149 289-312 1254-1728 1852-1976 133-149 289-312 1266-1270 1284-1304 1311-1321 1328-1333 1357-1362 1376-1380 1481-1486 1497-1501 1527-1535 1545-1549 1560-1565 1574-1584 1595-1613 1619-1624 1633-1706 1714-1722 1852-1860 1973-1976 56-813 7-89 1076-1224 1759-1825 14-813 801-1231 1750-1835 322-468 1750-1825 479-624 17-84 11-283 322-475 478-624 646-741 13-813 816-1230 2-1236 90-108 296-305 970-974 1272-1283 1886-1976 3h0gA(67-876) 8e-50 25.72% 4c2mA(4-93) 0.0002 32.63% 4qiwC(212-359) 0.0003 25.49% 2k0mA(31-94) 0.0009 35.82% 4qiwA(3-840) 4e-65 22.57% 4c2mA(1095-1515) 1e-20 16.41% 2k0mA(24-104) 2e-10 27.91% PF00623(6-159) 3e-22 38.71% PF11523(1-74) 4e-19 53.95% PF04983(2-145) 2e-08 28.38% PF04997(5-80) 0.0004 34.57% PF04997 0.00021 -127.2% PF00623 1.3e-33 122.2% PF04983 7.5e-09 40.0% PF05000 0.00086 10.6% 1i3qA(12-870) 2e-118 23.54% 1i3qA(1051-1413) 5e-18 16.71% e.29.1 5.6e-176 595.6%

Sequence

MEEESTSEILDGEIVGITFALASHHEICIQSISESAINHPSQLTNAFLGLPLEFGKCESC
GATEPDKCEGHFGYIQLPVPIYHPAHVNELKQMLSLLCLKCLKIKKAKGTSGGLADRLLG
VCCEEASQISIKDRASDGASYLELKLPSRSRLQPGCWNFLERYGYRYGSDYTRPLLAREV
KEILRRIPEESRKKLTAKGHIPQEGYILEYLPVPPNCLSVPEASDGFSTMSVDPSRIELK
DVLKKVIAIKSSRSGETNFESHKAEASEMFRVVDTYLQVRGTAKAARNIDMRYGVSKISD
SSSSKAWTEKMRTLFIRKGSGFSSRSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNR
GYLQKLVDDKLCLSYTQGSTTYSLRDGSKGHTELKPGQVVHRRVMDGDVVFINRPPTTHK
HSLQALRVYVHEDNTVKINPLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLL
SSHTGQLILQMGSDSLLSLRVMLERVFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAWT
VFQILQLAFPERLSCKGDRFLVDGSDLLKFDFGVDAMGSIINEIVTSIFLEKGPKETLGF
FDSLQPLLMESLFAEGFSLSLEDLSMSRADMDVIHNLIIREISPMVSRLRLSYRDELQLE
NSIHKVKEVAANFMLKSYSIRNLIDIKSNSAITKLVQQTGFLGLQLSDKKKFYTKTLVED
MAIFCKRKYGRISSSGDFGIVKGCFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGTLFK
NLMAVLRDIVITNDGTVRNTCSNSVIQFKYGVDSERGHQGLFEAGEPVGVLAATAMSNPA
YKAVLDSSPNSNSSWELMKEVLLCKVNFQNTTNDRRVILYLNECHCGKRFCQENAACTVR
NKLNKVSLKDTAVEFLVEYRKQPTISEIFGIDSCLHGHIHLNKTLLQDWNISMQDIHQKC
EDVINSLGQKKKKKATDDFKRTSLSVSECCSFRDPCGSKGSDMPCLTFSYNATDPDLERT
LDVLCNTVYPVLLEIVIKGDSRICSANIIWNSSDMTTWIRNRHASRRGEWVLDVTVEKSA
VKQSGDAWRVVIDSCLSVLHLIDTKRSIPYSVKQVQELLGLSCAFEQAVQRLSASVRMVS
KGVLKEHIILLANNMTCSGTMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEK
CHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMVISTTNAD
AFVSSPGFDVTEEEMAEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWD
NGCSGGSEWGVSKSTGGEANPESNWEKTTNVEKEDAWSSWNTRKDAQESSKSDSGGAWGI
KTKDADADTTPNWETSPAPKDSIVPENNEPTSDVWGHKSVSDKSWDKKNWGTESAPAAWG
STDAAVWGSSDKKNSETESDAAAWGSRDKNNSDVGSGAGVLGPWNKKSSETESNGATWGS
SDKTKSGAAAWNSWDKKNIETDSEPAAWGSQGKKNSETESGPAAWGAWDKKKSETEPGPA
GWGMGDKKNSETELGPAAMGNWDKKKSDTKSGPAAWGSTDAAAWGSSDKNNSETESDAAA
WGSRNKKTSEIESGAGAWGSWGQPSPTAEDKDTNEDDRNPWVSLKETKSREKDDKERSQW
GNPAKKFPSSGGWSNGGGADWKGNRNHTPRPPRSEDNLAPMFTATRQRLDSFTSEEQELL
SDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKH
TIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMKKYPDRAEEFIDKYFTKPRPSGNRDRNN
QDATPPGEEQSQPPNQSIGNGGDDFQTQTQSQSPSQTRAQSPSQAQAQSPSQTQSQSQSQ
SQSQSQSQSQSQSQSQSQSQSQSQSQSPSQTQTQSPSQTQAQAQSPSSQSPSQTQT

Region:1-1976
Length:1976aa
Label:Full sequence
Reset:click