Input sequence

Protein name Nuclear cap-binding protein subunit 1
Organism Rattus norvegicus Length 790
Disorder content 2.9% ProS content 1.3%
IDEAL NA UniProt Q56A27

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 790 1-23 24-528 529-536 537-790 24-528 537-790 1-23 5-14 29-790 1-23 29-790 1-23 485-746 308-470 28-240 29-290 291-480 481-790 27-290 291-480 481-790 523-534 657-667 671-686 747-760 645-712 1h2tC(1-704) 0.0 90.68% 3ukzC(1-23) 3e-07 100.0% 1h2tC(1-704) 0.0 90.16% 3ukzC(1-23) 8e-05 100.0% PF09090(1-242) 1e-47 45.25% PF09088(3-176) 3e-39 46.55% PF02854 7.9e-54 189.4% 1h2tC1(1-262) 2e-105 99.24% 1h2tC2(1-190) 1e-41 96.84% 1h2tC3(1-252) 1e-38 78.06% a.118.1 3.2e-106 338.4% a.118.1 9.7e-77 262.7% a.118.1 1.8e-105 355.7%

Sequence

MSRRRHSYENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFSSTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSYWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQHILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQVDDDDEGFRFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDKGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRGSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA

Region:1-790
Length:790aa
Label:Full sequence
Reset:click