Input sequence

Protein name Putative exosome complex exonuclease RRP42
Organism Dictyostelium discoideum Length 324
Disorder content 9.6% ProS content 6.2%
IDEAL NA UniProt Q54VM4

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 324 1-133 134-160 161-320 321-324 1-133 161-320 134-160 321-324 145-160 321-324 4-313 4-319 30-211 29-211 241-307 4-218 239-311 21-218 235-321 136-156 2nn6E(2-257) 2e-47 37.42% 2nn6A(6-269) 1e-40 25.79% PF01138(2-130) 4e-08 28.8% PF01138 4.5e-09 40.8% PF03725 9.3e-09 39.7% 2nn6E1(2-169) 2e-23 33.95% 2ba0G2(2-74) 6e-13 21.92% d.14.1 1.2e-23 84.1% d.101.1 1.1e-06 24.4%

Sequence

MQKISPSESLFIQQGVENNIRSDGRNRVDYRNFAIETGEIIHANGSARVKLSQTEVLVGV
KAEITHIQSEITSNLQQSDTSKRLVFSVNCCPSASPEFEGKGSEFLNIELSKQLERLYSH
PNVIKNLKLTNPIISNNNNNNNKIKEAEEGKEKEKEGDIITNSGDDNCFSIVSGKYYWTL
YVDAIVLDSDGNLFDALSIACRSALQNTRIPRVKAIQGEYEEITFEVSDDPEDTLSLSID
NVPICVTLTKIGNQFVIDTTLQEELCMNARLTVGVNSLANICSIQKGGIDGLDPTTINQM
INTAKVVGVKILNIMDKTLKEISN

Region:1-324
Length:324aa
Label:Full sequence
Reset:click