Input sequence

Protein name LIM domain-containing protein B
Organism Dictyostelium discoideum Length 553
Disorder content 33.1% ProS content 11.4%
IDEAL NA UniProt Q54NW4

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 553 1-182 183-552 553-553 183-552 1-182 553-553 1-22 72-76 84-92 138-155 174-182 389-446 205-261 256-312 263-383 441-502 229-315 389-446 377-449 449-502 324-384 191-265 390-441 265-315 207-262 265-320 330-387 390-446 449-504 245-289 430-473 371-414 203-231 200-230 232-289 290-354 355-414 415-479 99-149 160-176 507-553 513-552 1nypA(7-64) 1e-15 55.17% 1nypA(6-63) 4e-09 48.28% 1x3hA(9-65) 3e-07 35.09% 3mmkA(3-118) 4e-05 30.08% 2cuqA(10-72) 1e-05 36.51% 2miuA(3-92) 2e-12 32.22% 1nypA(7-64) 3e-12 55.17% 1x3hA(5-77) 3e-10 34.25% 2d8zA(8-62) 5e-05 34.55% 2curA(2-61) 8e-06 29.51% 2dj7A(1-77) 8e-05 28.57% PF00412(1-53) 1e-07 52.83% PF00412(1-52) 1e-06 48.08% PF00412 1.6e-18 72.1% PF00412 2.3e-08 38.4% PF00412 9e-09 39.7% PF00412 1.6e-24 92.0% PF00412 9.2e-09 39.7% 1x64A1(1-45) 1e-09 22.22% 1x64A1(2-45) 1e-07 20.45% 2darA2(2-45) 3e-09 29.55% 2darA2(17-45) 0.0005 44.83% g.39.1 1.2e-06 27.4% g.39.1 1.3e-17 57.2% g.39.1 2.6e-08 27.4% g.39.1 4.9e-15 49.0% g.39.1 1.3e-19 63.6%

Sequence

MANKNVLSEMDDLMAELGLVETTATPTSDQIKQPQQETAPTYLTYKDPNVSTGPGGDFRN
LNDNNGGISRGPGLMSTGPGLVSTGPGLMSTGPGLMSKGPGLPNNSINNNISNNNGGGIS
SGPGLSFGVSSGVSSGVSSGVSSGVSSGVTLVAQNHLARQPSPPLNSQQQQQQQLPTYLD
GVGTLQPISLAATTPDGRVVKANGPICGACGDMIIGVCTNALGRSYHPEHFVCTYCKLPF
SGSFIEHEEKLYCENDYLELFSPRCFACIKPIEDTCINALGNRYHPECFSCSGCGDKLRG
KPYKEEDGEVYCNTCKIARQKRLAAKSEICSKCKLPITGEYIILQGQPVHSEHYRCEECG
CEFNVGKTCHEYEGRLYCYEDYQKQILNICGACSKPIVGRSITALGKVWHPEHFTCTTCQ
VPFAGSAFREHAGKPYCESHYHQFFGRQCFKCSKPVVDTGVEVFGKIYHREHFTCTGCEC
VLGKEIMEWDGKPLCFKCFDALPKEVRKRIKEKKAGDKKAEAYREKLAKKEAKELKKERE
RAAKEKEKESKAK

Region:1-553
Length:553aa
Label:Full sequence
Reset:click