Input sequence

Protein name Retrotransposon-like protein 1
Organism Bos taurus Length 1331
Disorder content 20.9% ProS content 9.8%
IDEAL NA UniProt Q52QI2

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1331 1-182 183-356 357-391 392-512 513-529 530-597 598-602 603-977 978-992 993-1302 1303-1331 183-356 392-512 530-597 603-977 993-1302 1-182 357-391 513-529 978-992 1303-1331 7-15 58-65 75-94 158-169 357-391 513-529 978-992 1313-1321 1326-1331 636-863 636-769 772-829 225-318 629-770 806-967 411-510 385-504 633-975 19-30 98-119 132-145 565-581 988-1001 1014-1024 1080-1113 1148-1163 4hkqA(98-328) 3e-08 23.11% 1mmlA(108-251) 4e-09 11.11% 1al24(1-58) 8e-06 17.24% PF03732 1.5e-10 45.7% 1d0eA(106-256) 3e-13 18.18% 1mlvA1(5-169) 1e-11 5.99% 2pmaA1(17-125) 0.0001 11.01% b.50.1 1.8e-06 21.9% e.8.1 2.7e-41 129.6%

Sequence

MMEPSEDSFETMMERKNPSSKQMESSEGSSNTTVETPPGGRVEAAGLASGLAQEMGEQSI
DLRQDMEEPSSGPHREIKDPPNDLLQDLEESCEGSHLEEGGPFGGAPGEMEEEEDNPWES
QEDQDYYTDLAESEEDESPEEPDSSTVEVMGMVRSIISLYFRMQDLREQQRVAEEILMNA
INKGQLPNPKQFSGDRREYHEFIVLCQLILQSYPRVFCNDRLRVGYIISHLSGMAMEWAG
DLLERESSVIDDFPAFLEAMNDTFEYRQALRVAEDAMFNLRQGDRAAIEYINEFQSLVPT
LGWPDEVLQAHLCQGLKEDIRQYLFRIPQPNSLENLITLVLQIEDKLAERRAILRLLPES
RPRHLTWLDSPVPERWTVSTWLPNEFHPGIKRNHLFLLLLVRVNPYHSVAVQALVDSGAT
SNYMDEGFAQEHYVELYQKPYAESVQTADGSLVGNEPVWLYTEPLVCLHQNHQESLEFDI
VASSKFSVVLGIKWLQLHAPEIDWVKGRCTFHSPYCLKNCFRPPPPCIALEHHAVSLLPG
LPHQYSDLADVFNPKEADEETSDQPSSDGSDDLSESEPSELQQAGDSDQSEETFYDCAST
APWEPVGAGTQEKAKQEEFWDPKDMLTSRHDYVQMIPELFDQLHGATWFTKLELRGTIVE
ESMSIHQTEDVWKVAFGLELQDMASYQPFLICADPIIPQGVIHFILKDMIGLFVVSYGQD
VLVYSMSQEEHYHHVRQVLVRFRYHYVYCSLQRSQFHRHTAEFLGFVVTPKGVKLNKSIV
STITGYPTPGSRKSLRNLMEFAFPYRHFVERFADITEPLVRQLQADLPFYWGDEEQEAFV
GLKRAFRKAPLLYHPKPQNQFYLQTGVTKTSLHASLIQMDKRTGKKVCCAFYSRNISPME
VEASPAEMKILPIRAAFMVWCRYLENTEEPIMILLNKEDLASLNNDRLTVLLPGHWVFFF
THFNFDVMEMPSSEDDQPLPRRQRLGERAQQRRVATTTRPTMLVTMPAPTGDQSPESEDE
EESEGALHPDEPNGQNLQQGYLALIPVDQIFNSFLAHFSMAQIRAVLLHFYRSLLFWKNL
LAMAALLVMLRFRRRLALLPAPAADPARPPQRRSLRLFLDASLLTSSGIATAVTQLFTQM
PPLVGTNALPAEELAELFLGPGPWQLNALRGLQMTPRFWQMLCQFFGIRGRALEGTQTHP
SPHQSLAPHVEGDEYVVLREALQDDLQRFRQCGLHDGLQDTSQDAQDDVWALRPRQHLPT
EAEVLARLTYIRSTQGGSVVIHRELTARDLIDFLASVYTQALPTLVEASPPREGATLEEL
PSDADEDAGLD

Region:1-1331
Length:1331aa
Label:Full sequence
Reset:click