Input sequence

Protein name RNA polymerase II-associated factor 1 homolog
Organism Rattus norvegicus Length 535
Disorder content 42.6% ProS content 7.7%
IDEAL NA UniProt Q4V886

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR COILS:coiledCoil 0 535 1-24 25-110 111-162 163-228 229-233 234-276 277-281 282-388 389-535 25-110 163-228 234-276 282-388 1-24 111-162 277-281 389-535 1-7 124-142 153-162 277-281 170-300 170-304 30-371 27-441 372-390 392-452 456-470 476-511 514-535 354-388 4m6tA(1-140) 1e-42 65.0% 4m6tA(1-144) 1e-23 60.42% PF03985(4-340) 2e-72 51.59% PF03985 4.2e-258 868.0%

Sequence

MAPTIQTQAQREDGHRPNSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQ
YKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKR
SQQHAKVVPWMRKTEYISTEFNRYGISNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIE
KTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEM
MSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVK
NKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKE
LEAQEARKAQLENHEPEEEEEEEMEAEEKEAGGSDEEHEKGSSSEKEGSEDERSGSESDR
EEGDRDEASDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAHRGSDN
DSDSGSDGGGQRSRSQSRSRSRSASPFPSGSEHSAQEDGSEAAASDSSEADSDSD

Region:1-535
Length:535aa
Label:Full sequence
Reset:click