Input sequence

Protein name E3 ubiquitin ligase TRIM40
Organism Mus musculus Length 246
Disorder content 7.3% ProS content 6.5%
IDEAL NA UniProt Q3UWA4

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP COILS:coiledCoil 0 246 1-2 3-42 43-47 48-230 231-246 3-42 48-230 1-2 231-246 231-246 12-66 69-222 12-63 108-226 12-54 56-125 5-67 7-81 67-105 109-147 2ecwA(22-77) 2e-09 50.0% 4tn3A(4-175) 7e-07 23.84% 2egpA(15-68) 7e-12 46.3% 4cg4A(3-126) 0.0006 15.87% PF00097 1.7e-12 52.1% 2djaA1(2-71) 4e-08 20.0% 1fbvA4(19-77) 3e-07 25.4% g.44.1 8.4e-14 46.4% g.43.1 1.9e-08 32.5%

Sequence

MGSLDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLTQHMDKASVSGILSCPVCRKPCSE
GVLGDNYICHTHQKRVRRFCEASGHLLCEECLQSPEHQSHTELSIENAISHYKERLNRRS
RKLRKDLGNLQQLKAQEKKMLQALQVDCECHRLRTDLQNQDQTKEQLKALPWHWLDQEDL
PEEVAKIFSFSEAVTQLSILVSGLERMAKDLDASTLKDASDLLDRSAPQKLEGLLSRVSP
AGPKLS

Region:1-246
Length:246aa
Label:Full sequence
Reset:click