Input sequence

Protein name LIM and calponin homology domains-containing protein 1
Organism Mus musculus Length 1057
Disorder content 66.7% ProS content 24.8%
IDEAL NA UniProt Q3UH68

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1057 1-19 20-170 171-346 347-395 396-408 409-440 441-774 775-827 828-986 987-1053 1054-1057 20-170 347-395 409-440 775-827 987-1053 1-19 171-346 396-408 441-774 828-986 1054-1057 5-10 171-189 198-258 263-292 311-333 343-346 396-400 444-458 659-679 730-748 756-768 828-832 859-864 876-887 905-911 944-949 976-981 1054-1057 30-116 985-1047 29-154 982-1045 29-105 22-138 987-1050 29-139 976-1044 25-184 8-28 197-213 223-236 285-296 384-394 567-586 771-796 800-826 835-847 347-395 409-440 775-827 1h67A(11-96) 5e-12 40.23% 1rutX(3-61) 0.0005 34.38% 1wynA(24-136) 3e-10 30.95% 1x68A(3-63) 8e-06 27.69% PF00307(9-86) 7e-08 40.74% PF00307 2.9e-11 48.0% PF00412 3.7e-05 18.4% 1h67A(10-107) 6e-14 33.33% 1oqjA(20-88) 0.0001 8.57% a.40.1 9.5e-23 78.3%

Sequence

MACPALGLEVLQPLQPEPPPEPAFAEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNTILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKNLDYS
RKLKNVLVTIYWLGKAANSCASYGGTTLNLKEFEGLLAQMRKETDDIDSPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEFRKSWST
ATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAAVLPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLMSGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNVSSFP
NDPSPMKYLRQQSLPPPKFTATVETTIARTSVPESIASAGTGSPSKIITPNTVPMLTPRP
YSQPKNSQEVLKTFKVDGKVSMNGEMAPGDEEGKEKEGPAAAAPGPSLTKSQMFEGVATV
HDSPVQVKQGSNSIEINIKKPNSAPQELTAASEETESNGQEDEDGEERPGTGDLEPDSAE
PQHFTTTVTRCSPTVALVEFSSNPQLKNEVPEQGQKKPEDEMSGKVELVLSQKVAKPKSP
EPEATLTFPFLDKMPETNQLHLPNPSSQADSPSSEKSPGSTPFKFWAWDPEEERRRQEKW
QQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSAD
QLSTSLSVTEGSGTRNKMDLENCPDKENERRQKTPFQENDGDSLLKTREGGLPEEQSLTP
SPSANPEISVSKGIHQDPQLEAEAGAPHCGTNPQPAQDPPRNQQIPNPPTSTSEDVKPKT
LALEKTINHQMESPGERRKSISGKKLCSSCGLTLGKGAAMIIETLNLYFHIQCFRCGICK
GQLGDAVSGTDVRIRNGLLNCTDCYMRSRSAGQPTTL

Region:1-1057
Length:1057aa
Label:Full sequence
Reset:click