Input sequence

Protein name Probable ATP-dependent RNA helicase DDX56
Organism Bos taurus Length 546
Disorder content 21.6% ProS content 10.8%
IDEAL NA UniProt Q3SZ40

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 546 1-6 7-73 74-79 80-321 322-342 343-448 449-480 481-487 488-546 7-73 80-321 343-448 1-6 322-342 449-480 488-546 339-342 449-480 488-500 526-535 9-401 9-405 33-199 288-379 31-207 277-380 9-222 231-404 4-400 246-256 509-524 4kbfA(3-354) 4e-42 31.28% 4ct4B(7-363) 2e-85 29.47% PF00270(3-160) 2e-24 41.32% PF00271(11-75) 5e-05 29.35% PF00270 2.5e-53 187.8% PF00271 2e-12 51.9% 1fuuA(13-215) 2e-38 33.18% 1gm5A4(2-149) 5e-15 12.5% c.37.1 4.8e-49 157.7%

Sequence

MEDPESLGFEHMGLDHRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQLLLHRKATGPVVEQAVRALVLVPTKELARQAQSMIQQLAAYCARDIRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRILNHLQQDNLKLRDSMELLVVDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPACVLNGELPLRSRCHI
ISQFNQGFYDCVIATDAEVLGPPVKGKHRGKGPKRDKASDPEAGVARGIDFHHVCAVLNF
DLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQSQLGKIEELLSGDSGAPVLLPYQFHM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGNVPDYLVPPALRGLVHPHKKRKKPLASKKAKKAKTQNPLRSFKHRGEKCR
PTAAPS

Region:1-546
Length:546aa
Label:Full sequence
Reset:click