Input sequence

Protein name ATP-dependent RNA helicase TDRD9
Organism Rattus norvegicus Length 1384
Disorder content 6.4% ProS content 3.8%
IDEAL NA UniProt Q3MHU3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1384 1-28 29-111 112-724 725-729 730-1111 1112-1115 1116-1121 1122-1384 1-28 112-724 730-1111 1122-1384 29-111 1116-1121 29-41 57-66 83-111 1121-1121 126-721 964-1083 146-544 913-1086 570-668 924-1012 410-501 137-300 409-503 566-667 896-1017 391-657 133-291 926-1010 227-520 143-292 287-645 944-1002 29-40 548-562 896-912 2xauA(76-630) 4e-57 27.63% 4b9wA(76-189) 2e-08 36.07% 4cbgA(1-311) 3e-33 15.8% 4b9wA(25-192) 3e-20 27.68% PF04408(5-92) 1e-09 43.56% PF00567(25-115) 3e-06 35.48% PF00271(1-74) 0.0003 30.43% PF00270 2.2e-06 2.9% PF00271 5.7e-14 57.0% PF04408 8.8e-24 89.6% PF00567 4.4e-17 67.4% 1hrkA(97-356) 2e-22 6.41% 1q1lA(35-205) 1e-14 12.79% 2hqxA1(5-89) 7e-12 26.14% 1wp9A2(28-274) 3e-05 12.46% c.37.1 6.6e-31 102.0% c.37.1 1.5e-44 143.3% b.34.9 1.5e-09 34.4%

Sequence

MLRKLTVDQINDWFTIGKTVTNVELLGLPPAFPAEAPREEVQRSEEVPSEAPTAQAQDPV
KATALARPASAFGRSLSQRSSEVEYINKYRQLEAQELDIYGQDQPPSGPGLRSPLAKISN
VACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSA
FCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQK
IVSAKSLMEFTHVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADY
FAVPVQNKMNPAYVFEVEGKPHTIEQYYLNDLGHIYHSGLPPYRLEEPVITKDVYEVAVS
LIQMFDDLDMKESGNKTWSGAQFVSERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPL
HSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQ
SLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKV
KLLDMGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVL
AQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSR
SDCLALVEAFRAWQACRQRGELRHPKDELDWGRLNYIQIKRIREVAELYEELKNRISQFN
MFVDPRHPVLDQEYPYKQRFILQVVLAGAFYPNYFTFGQPDEEMAVRELAGRDPKTTVVL
KHIPPYGFLYYKQLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAVNLAVKMSQ
LKVSLELSIHAAEEIEGKVQGGSVSKLRNTRVNVDFQKQTVDPMQVSFNTLDRPRTVADL
LLTVDVTEVVEVGHFWGYRIDERNAELLRQLTAEINRLELVPLPIHPHPDLVCLAPFTDY
NKESYFRAQILYVSGNSAEVFFVDYGNRSHVDLDLLREIPCQLLELPFQALEFKICKMRP
SAKSLICGEHWSGGANGRFAALVSGCPLLVKVFSIVHSVLHVDVYRYSGAQDAVNIRDVL
IREGYAELAEESYESKQSYEVLKGFFAKSVDTMPDGSVSSPMKDDEKHLIQILLESFASN
RLGAPNCKAVLHGPFNPYELKCHSLTRISKFRCVWIEKESINSVVISDSPADLHQRMLVA
ASLSVNETGSTMLLRETSLMPHIPGLPALLSMLFAPVMELRVDREGKCYTGVLCGLGWNS
TTEAPILPEHDIELAFDVCFNVEDIVEINILRAAINKLACDGPHGPKYLGPERIAQLQEN
ARQKLLGLFCRLKPREKITPQWHEKPYEWNQVDPRLVIEQAEREGGPGKSTCLYQLHTPV
VLSP

Region:1-1384
Length:1384aa
Label:Full sequence
Reset:click